Sequence 1: | NP_001284879.1 | Gene: | rg / 44531 | FlyBaseID: | FBgn0266098 | Length: | 3785 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038958577.1 | Gene: | Lrba / 361975 | RGDID: | 1311428 | Length: | 2883 | Species: | Rattus norvegicus |
Alignment Length: | 3804 | Identity: | 1509/3804 - (39%) |
---|---|---|---|
Similarity: | 2070/3804 - (54%) | Gaps: | 1011/3804 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 27 LKFAVLIGLIEVGQVTNREVVNTVLHLLVGGEFDMELNFVIQDAQNIKHMLELLDHCPPNLQAEI 91
Fly 92 WSVFIAILRKSVRNLQACTDVGLIEHVLVRLQRSETVVADLLIEMLGVLASYSITVKELKLLFGT 156
Fly 157 MKATNGKWPRHSAKLLNVLRQMPHRNGPDVFFSFPGRKGSAMVLPPLAKWPYENGFTFTTWFRLD 221
Fly 222 PINSVNIEREKPYLYCFKTSKGVGYTAHFVGNCLVLTSMKVKGKGFQHCVKYEFQPRKWYMIAIV 286
Fly 287 YIYNRWTKSEIKCLVNGQLASSTEMAWFVSTNDPFDKCYIGATPELDEERVFCGQMSAIYLFSEA 351
Fly 352 LTTQQICAMHRLGPGYKSQFRFDNECYLNLPDNHKRVSHFQLLPATLGASALSGGSGSGTGSGTG 416
Fly 417 NDASAAAAAAVAAGQQQQLQLQFQILAAEQEARAIDWSDEKLDLNAAFVKIRAVLTARNAVTLAG 481
Fly 482 SSSTGTTAVATAAAAAAAAGAGAGTTAAATSAAAAAAATQNENDAAVGQQQHATHHHATAATGSA 546
Fly 547 DDPLGHLPTGNASSSSSSFEQLRRMSSVSSLNSMVGSADTEEVNQLKAVLYDGKLSNAIVFMYNP 611
Fly 612 VATDGQLCLQSSPKGNVSYFVHTPHALMLQDVKAVVTHSIHCTLNSIGGIQVLFPLFSQLDMAHE 676
Fly 677 GLGDIKRDPTLCSKLLGFICELVETSQTVQQHMIQNRGFLVISFMLQRSSREHLTLEVLGSFLNL 741
Fly 742 TKYLVTCLSANSDLLLKQLFCFSFLTWQLLDHVLFNPALWIYTPANVQARLYSYLATEFLSDTQI 806
Fly 807 YSNVRRVSTVLQTVHTLKYYYWVVNPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFLKQLIMIG 871
Fly 872 NGVKEDELQSILNYLTTMHEDENLHDVLQMLISLMSEHPSSMVPAFDVKHGVRSIFKLLAAESQL 936
Fly 937 IRLQALKLLGFFLSRSTHKRKYDVMSPHNLYTLLAERLLLYEESLSLPTYNVLYEIMTEHISQQI 1001
Fly 1002 LYTRHPEPESHYRLENPMILKVVATLIRQSKQTESLIDVKKLFLQDMTLLCNSNRENRRTVLQMS 1066
Fly 1067 VWQEWLIAMAYIHPKSSEEQKISDMVYSLFRMLLHHAIKHEYGGWRVWVDTLAIVHSKVSYEEFK 1131
Fly 1132 LQFAQMYEHYERQRTDNITDPALRQARPISTISGWEREELHQQQNGGSAAAVATNQTAAVKGSVS 1196
Fly 1197 IASLEDVPPVVEEEVEELELEEVEIQEGP-------------ITEETEQKSVIANISDVYNEQLK 1248
Fly 1249 TDATCNGNLEDVKEEEPVQQQIGDLEKQPEPSTPLGALRETLQLGDDMDVEELELATAKDALNAE 1313
Fly 1314 QHVSRVLQASEAALNDCKMAVDDVLQESSSVLKDEEIELAVNEVVQGVLNNEKKTQSQDNKDNKE 1378
Fly 1379 QPGEQDVNVSLLNSKNLLNNNNNNNNNSPSPTPTTATATAETEAETEVNANEIVSSTEAPKAETE 1443
Fly 1444 TSVAPEVETPETAKPSPIVPSPVLATNQKTEDAANKLNNNEKLAEISASPEPPIVVETPEADLLQ 1508
Fly 1509 LSDSETKPNKETEAEDSVALAVRDIVEQLIDKVIDATEAESASETKTETNNNEIPKKEKQTSEEP 1573
Fly 1574 EDVE-TAETLAAAAKEIVQEVVEAALVMVQEESTQEKPEKGANSEEEKNEIGKEEILL-----QL 1632
Fly 1633 EEKPASTEVQETKIEGDLKKPEDPKGHSSVEPKTPNLEEPKPQETEQQKSQEVAEELPQKPEEQV 1697
Fly 1698 VAIVNQVLDTLVDDTVKAVAAEQTTQTSPAPEEQSPQILAMESPATS-VRVKPTEVDSTTQTTPK 1761
Fly 1762 NEAGSSLLVEQVQQVLQEDDAQQSAGMTIEDEDYSNQQAAAAVENANSSQLDANHYGPGNPESKQ 1826
Fly 1827 QQQRSKSGSTRPMFSPGPTRPPFRIPEFKWSYIHQRLLSDVLFSLETDIQVWRSHSTKSVLDFVN 1891
Fly 1892 SSENAIFVVNTVHLISQLADNLIIACGGLLPLLASATSPNSELDVLEPTQGMPLEVAVSFLQRLV 1956
Fly 1957 NMADVLIFATSLNFGELEAEKNMSSGGILRQCLRLVCTCAVRNCLECKERTRYNV-GALARDVPG 2020
Fly 2021 AAHLQALIRGAQASPKNIVESITGQLSPVKDPEKLLQDMDVNRLRAVIYRDVEETKQAQFLSLAI 2085
Fly 2086 VYFISVLMVSKYRDILEPPAEPQIQRQSPVLQRTAGGEAASARPLFPQWSHHVYPQFLPESHQNH 2150
Fly 2151 NSNMQHQQQQQQQQQHQQQQHYYQQQQQQQVVHNHSHHHMTAAYYQQQQHQQVAAGQQQHSPTPL 2215
Fly 2216 ATHSTSSSASSTATSQPASSSSLSSLASQSQQQSHRQLHKQQQQQQQQQQQQQPHYHPHQPHYGL 2280
Fly 2281 INGHQQHPQLNGKHYAENGSTAGYHPHSHPHPHGGYMRNGDTSTLQQNGMPDYQAVGLMNGHGSG 2345
Fly 2346 GTGNNNNSSLMNNMRNLRNGGGANSSSSPPGSHQVIQGVATAGAVNANAAVGVGMG-GAVGVGMG 2409
Fly 2410 GVAGGLDGGVVYKTSAINNNYRYNGRNASAGTGGRQIQDSDYEIIVVDENNPSVLADNDSHSSGP 2474
Fly 2475 PSIKANQTTTIATTTTTTATTHINNNNTKTTTSNAPTATIKIQQQPLSPPKPLVPQKLPKSVDSD 2539
Fly 2540 VGSLNMNSTENEVPEVESSSEILIDDHKPSHSNDESWTDVNLNEDAAVQAASAGIVVGLVDNRGN 2604
Fly 2605 VISDKHDPSHHNQQQQQQAGIIGQQQQHGSLGHSERGDKPDSEISVV------RVPDGYGGAGSG 2663
Fly 2664 GGVNSGQGQGVPSNQRPRPEELPMKAPALVAQLPLTTPSREASLTQKLEIALGPVCPLLREIMVD 2728
Fly 2729 FAPFLSKTLVGSHGQELLMEGKGLTTFKNSHSVVELVMLLCSQEWQNSLQKHAGLAFIELINEGR 2793
Fly 2794 LLSHAMKDHIVRVANEAEFILNRMRADDVLKHADFESQCAQTLLERREEERMCDHLITAARRRDN 2858
Fly 2859 VIASRLLEKVRNIMCNRHGAWGDSSSTSSGGAIVGAVQKSPYWKLDAWEDDARRRKRMVQNPRGS 2923
Fly 2924 SHPQATLKAALENGGPEDAILQTRDEFHTQIAVSRTHPSGQHNGE---LL---DDAELLIEDREL 2982
Fly 2983 DLDLTGPVNISTKARLIAPGLVAPGTVSITSTEMFFEVDEEHPEFQKIDGEVLKYCDHLHGKWYF 3047
Fly 3048 SEVRAIFSRRYLLQNVALEIFLASRTSILFAFPDQHTVKKVIKALPRVGVGIKYGIPQTRRASMM 3112
Fly 3113 SPRQLMRNSNMTQKWQRREISNFEYLMFLNTIAGRTYNDLNQYPIFPWVLTNYESKDLDLSLPSN 3177
Fly 3178 YRDLSKPIGALNPSRRAYFEERYESWDSDTIPPFHYGTHYSTAAFTLNWLVRVEPFTTMFLALQG 3242
Fly 3243 GKFDYPDRLFSSVSLSWKNCQRDTSDVKELIPEWYFLPEMFYNSSGYRLGHREDGALVDDIELPP 3307
Fly 3308 WAKSPEEFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAIRATNVFYYLTYEGSVDLDGVLD 3372
Fly 3373 PVMREAVENQIRNFGQTPSQLLMEPHPPRSSAMHL-----SPMMFS-AMPEDLCQMLKFYQNSPV 3431
Fly 3432 IHISANTYPQLSLPSVVTVTAGHQFAVNRWNCNYTASVQSPSYAESPQSPGSNQPLTIDPVLAVH 3496
Fly 3497 GTNNNSNAASRRHLGDNFSQMLKIRSNCFVTTVDSRFLIACGFWDNSFRVFATETAKIVQIVFGH 3561
Fly 3562 FGVVTCMARSECNITSDCYIASGSADCTVLLWHWNARTQSIVGEGDVP-----TPRATLTGHEQA 3621
Fly 3622 VTSVVISAELGLVVSGSSNGPVLIHTTFGDLLRSLDPPAEFHSPELITMSREGFIVINYDKGNVA 3686
Fly 3687 AYTINGKKLRHETHNDNLQCMLLSRDGEYLMTAGDRGIVEVWRTFNLAPLYAFPACNAGIRSLAL 3751
Fly 3752 THDQKYLLAGLSTGSIIVFHIDFNRWHHEYQQRY 3785 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rg | NP_001284879.1 | LamG | 210..358 | CDD:304605 | 94/147 (64%) |
DUF4704 | 634..918 | CDD:292415 | 164/283 (58%) | ||
MARCKS | 1434..1751 | CDD:280269 | 57/323 (18%) | ||
DUF1088 | 2791..2972 | CDD:284000 | 90/186 (48%) | ||
PH_BEACH | 2996..3093 | CDD:291510 | 58/96 (60%) | ||
Beach | 3125..3401 | CDD:280327 | 211/275 (77%) | ||
WD40 repeat | 3524..3560 | CDD:293791 | 20/35 (57%) | ||
WD40 | <3526..3729 | CDD:295369 | 106/207 (51%) | ||
WD40 | <3530..3773 | CDD:225201 | 122/247 (49%) | ||
WD40 repeat | 3566..3617 | CDD:293791 | 29/55 (53%) | ||
WD40 repeat | 3622..3657 | CDD:293791 | 21/34 (62%) | ||
WD40 repeat | 3669..3699 | CDD:293791 | 11/29 (38%) | ||
WD40 repeat | 3704..3739 | CDD:293791 | 15/34 (44%) | ||
Lrba | XP_038958577.1 | LamG | 229..376 | CDD:419873 | 93/146 (64%) |
DUF4704 | 451..711 | CDD:406270 | 156/273 (57%) | ||
PRK13108 | <1020..1162 | CDD:237284 | 44/320 (14%) | ||
DUF1088 | 1906..2073 | CDD:399463 | 90/183 (49%) | ||
PH_BEACH | 2099..2196 | CDD:405526 | 58/96 (60%) | ||
Beach | 2228..2504 | CDD:396627 | 211/275 (77%) | ||
WD40 repeat | 2620..2656 | CDD:293791 | 20/35 (57%) | ||
WD40 | <2625..2825 | CDD:421866 | 103/202 (51%) | ||
WD40 repeat | 2662..2715 | CDD:293791 | 29/55 (53%) | ||
WD40 repeat | 2720..2755 | CDD:293791 | 21/34 (62%) | ||
WD40 repeat | 2760..2789 | CDD:293791 | 11/28 (39%) | ||
WD40 repeat | 2796..2836 | CDD:293791 | 16/39 (41%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 472 | 1.000 | Domainoid score | I425 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 2588 | 1.000 | Inparanoid score | I26 |
OMA | 1 | 1.010 | - | - | QHG46555 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002549 | |
OrthoInspector | 1 | 1.000 | - | - | oto95838 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103326 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR13743 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1939 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 10.970 |