DRSC/TRiP Functional Genomics Resources

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Protein Alignment rg and wdfy-3

DIOPT Version :9

Sequence 1:NP_001284879.1 Gene:rg / 44531 FlyBaseID:FBgn0266098 Length:3785 Species:Drosophila melanogaster
Sequence 2:NP_001255658.1 Gene:wdfy-3 / 178220 WormBaseID:WBGene00007752 Length:3358 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rgNP_001284879.1 LamG 210..358 CDD:304605
DUF4704 634..918 CDD:292415
MARCKS 1434..1751 CDD:280269
DUF1088 2791..2972 CDD:284000
PH_BEACH 2996..3093 CDD:291510
Beach 3125..3401 CDD:280327
WD40 repeat 3524..3560 CDD:293791
WD40 <3526..3729 CDD:295369
WD40 <3530..3773 CDD:225201
WD40 repeat 3566..3617 CDD:293791
WD40 repeat 3622..3657 CDD:293791
WD40 repeat 3669..3699 CDD:293791
WD40 repeat 3704..3739 CDD:293791
wdfy-3NP_001255658.1 DUF4800 <2179..2260 CDD:292675
PH_BEACH 2423..2550 CDD:275391
Beach 2591..2871 CDD:280327
WD40 <2945..3150 CDD:295369
WD40 <2945..3149 CDD:225201
WD40 repeat 2971..3010 CDD:293791
WD40 repeat 3016..3052 CDD:293791
WD40 repeat 3057..3091 CDD:293791
FYVE_WDFY3 3285..3349 CDD:277259
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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