| Sequence 1: | NP_001284879.1 | Gene: | rg / 44531 | FlyBaseID: | FBgn0266098 | Length: | 3785 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_011542333.1 | Gene: | LYST / 1130 | HGNCID: | 1968 | Length: | 3855 | Species: | Homo sapiens |
| Alignment Length: | 3952 | Identity: | 760/3952 - (19%) |
|---|---|---|---|
| Similarity: | 1322/3952 - (33%) | Gaps: | 1314/3952 - (33%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 530 QQQHATHHHATAATGSADDPLGHLPTGNASSSSSSFEQLRRMSSVSSLNSMVGSADTEE------ 588
Fly 589 ------------VNQLKAVLYDGKLSNAIVFMYNPVATDGQLCLQSSPKGNVSYFVHTPHALMLQ 641
Fly 642 DVKAVVTHSIH----CTLNSIGGIQVLFPLFSQLDMAHEGLGDIKRDPTLCSKLLGFICELVETS 702
Fly 703 QTVQQHMIQNRGFLVISFMLQRSSREHLTLEVLGSFLNLTKYL---VTCLSANSDLLLK------ 758
Fly 759 -QLFCFS---FLTWQLLDHVLFNPALWIYTPAN--VQARLYSYLATEFLS-DTQIYSNVRRVSTV 816
Fly 817 LQTVHTLKYYYWVVNPRAKSGIIPKGLDGPRPAQKDILAIRAYILLFL------KQLIMIGNGVK 875
Fly 876 EDELQSILNYLTTMHEDENLHDVLQMLISLMSEHPSSMVPAFDVKHGVRSIFKLLAA-------- 932
Fly 933 ESQLIRLQALKLLGFF--LSRSTHKRKYDV-----MSPHNLYTLLA------------------E 972
Fly 973 RLLLYEESLSLPTYNVLYEIMTEHISQQILYTRHPEPE------------------------SHY 1013
Fly 1014 RLE-----NPMILKVVATLIRQSKQTESLIDVKKLFLQDMTLLCNSNRENRRTVLQMSVWQEWLI 1073
Fly 1074 AMAY-IHPKSSEEQKISDMVYSLFRMLLHHAIKHEYGGWRVWVDTLAIVHSKVSYEEFKLQFAQM 1137
Fly 1138 YE-----------------HYERQRTDNITDPALRQARPISTISGWEREELHQQQNGGSAAAVAT 1185
Fly 1186 NQTA---------AVKGSVSIASLEDVPPVVEEEVEELELEEVEIQEGPITEETEQKSVIANISD 1241
Fly 1242 VYNEQLKTDATCNGNLEDVKEEEPVQQQIGDLEKQPE----PSTPLGALRETLQLGDDM--DVEE 1300
Fly 1301 LELATAKDALNAEQHVSRVLQASEAALNDCKMAVDDVLQESSSVL--KDEEIELAVNE-VVQGVL 1362
Fly 1363 NNEKKTQSQDNKDNKE-QPGEQDVNVSLLNSKNLLNNNNNNNNNSPSPTPTTATATAETEAETEV 1426
Fly 1427 NANEIVSSTEAPKAETETSVAPEVETPETAKPS-----PIVPSPVLATNQKTEDAANKLNNNE-- 1484
Fly 1485 --KLAEISASPEPPIVVETPEADLLQLSDSETKPNKETEA-------------------EDSVAL 1528
Fly 1529 AVRDIVEQLIDKVIDATEAESASETKTETNNNEIPKKEKQ-----------TSEEPEDVE----- 1577
Fly 1578 -------TAETLAAAAKEIVQEVVE-------------------AALVMVQEESTQEK---PEKG 1613
Fly 1614 AN-------SEEEKNEI-GKEEILLQLEEKPAST----EVQETKIEGD-----------LKKPED 1655
Fly 1656 --------------------------------PKGHSSVEP---KTPNLEEPKPQETEQQKSQEV 1685
Fly 1686 AEELPQKPEEQVVAIVNQV---------LDTLVDDTVKAVAAEQTTQTSPAP-EEQSPQILAMES 1740
Fly 1741 PATSVRVKPTEVDSTTQTTPKNEAGSSLLVEQVQQVLQEDDAQQSAGMTIE---DEDYSNQQAAA 1802
Fly 1803 AVENANSSQLDANHYGPGNPESKQQQQRSKSGSTRPMFSPGPTRPPFRI---------------- 1851
Fly 1852 ---PEFKWSYIHQRLLSDV--LFSLETDIQVWRS------HSTKSVLDFVNSSENAIFVVNTVHL 1905
Fly 1906 I-SQLADNLIIACGGLLPLLASATSPNSELDVLEPTQGMPLEVAVSFLQRLVNM----ADVLIFA 1965
Fly 1966 TSLNFGELEAEKNMSSGGILRQCLRLVCTCAVRNCLECKERTRYNVGALARDVPGAAHLQALIRG 2030
Fly 2031 AQASPKNIVESITGQLSPVKDPEKLLQDMDVNRLRAVIYRDVEETKQAQFLSLAIVYFISVLMVS 2095
Fly 2096 KYRDILEPPAEPQIQRQSPVLQRTAGGEAASARPLFPQWSHHVYPQ-FLPESHQNHNSNMQHQQQ 2159
Fly 2160 QQQQQQHQQQQHYYQQQQQQQVVHNHS-HHHMTAAYYQQQQHQQVAAG-----QQQHSPTPLATH 2218
Fly 2219 S--TSSSASSTATSQPASSSSLSSLASQ----------SQQQS-----------------HRQLH 2254
Fly 2255 KQQQQQQQQQQQQQPHYHPHQPHY--GLINGHQQHPQLNGKHYA---ENGSTA------------ 2302
Fly 2303 ----------GYHP--------HS----------------------------------------- 2308
Fly 2309 ------HPHPHGGYMRNGDTSTLQQNGMPDYQAVGLMNGHGSGGTGNNNNSSLMNNMRNLRNGGG 2367
Fly 2368 ANSSSSPPGSHQVIQGVATAGAVNANAAVGVGMGGAVGVG----------------------MGG 2410
Fly 2411 VAGGLDGGVVYKTS-----------------AINNNYRYNGRNASAGTGG--RQIQDSDYEIIVV 2456
Fly 2457 DENNPSV-LADNDSHSSGPPSIKANQTTTIATTTTTTATTHINNNNTKTTTSNAPTATIKIQQQP 2520
Fly 2521 LSPPKPLVPQKLPKSVDSDVGSLNMNSTENEVPEVESSSEILIDDHKPSHSNDESWTDVNLNEDA 2585
Fly 2586 AVQAASAGIVVGLVDNRGNVISDKHDPSHHNQQQQQQAGIIGQQQQHGSLGHSERGDKPDSE--I 2648
Fly 2649 SVVRVPDGYGGAGSGGGVNSGQGQGVPSNQRPR------PEELPMKAPALV---------AQLPL 2698
Fly 2699 TTPSR--EASLTQKLE----IALGPVCPLLREIMVDFAPFL--------SKTLVGS--------- 2740
Fly 2741 HGQE------------LLMEG--KGLTTFKNSHSVVELVMLL--CSQEWQNSLQKHAGLAFIELI 2789
Fly 2790 NEGRLLSHAMKD-----------HIVRVANEAEFILNRMRADDVLKHADFESQCAQTLL------ 2837
Fly 2838 -----ERREEE-----------RMCDHLI---TAARRRDNVIASRLLEKVRNIMCNRHG----AW 2879
Fly 2880 GDSSSTSSGGAIVGAVQKSPYWKLDAWEDD----------------ARRRKRMVQNPRG------ 2922
Fly 2923 --SSHPQATLKAALENGGPEDAILQTRDEFHTQIAVS---RTHPSGQHNGE--------LLDDAE 2974
Fly 2975 LLIEDRELDLDLTGP--------------------------VNISTKARLIAPGLVAPGTVSITS 3013
Fly 3014 TEMFFEVD--EEHPEFQKIDGEVLKYCDHLHGKWYFSEVRAIFSRRYLLQNVALEIFLASRTSIL 3076
Fly 3077 FAFPD-------QHTVKKVIKALPRVGVGIKYGIPQTRRASMMSPRQLMRNSNMTQKWQRREISN 3134
Fly 3135 FEYLMFLNTIAGRTYNDLNQYPIFPWVLTNYESKDLDLSLPSNYRDLSKPIGALNPSRR------ 3193
Fly 3194 -AYFEERYE--SWDSDTIP---PFHYGTHYSTAAFTLNWLVRVEPFTTMFLALQGGKFDYPDRLF 3252
Fly 3253 SSVSLSWK-NCQRDTSDVKELIPEWYFLPEMFYNSSGYRLGHREDGALVDDIELPPWAKS-PEEF 3315
Fly 3316 VRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAIRATNVFYYLTYEGSVDLDGVLDPVMREAVE 3380
Fly 3381 NQIRNFGQTPSQLLMEPHPPRSSA-MHLSPMMFSAMPEDLCQMLKFYQNSPVIHISANTYPQLSL 3444
Fly 3445 PSVVTVTAGHQFAVNRWNCNYTASVQSPSYAESPQSP--------------GSNQPLTIDPVLAV 3495
Fly 3496 HGTNNNSNAASRRHLGDNFSQMLKIRSNCFVTTVDSRF--LIACGFWDNSFRVFATETAKIVQIV 3558
Fly 3559 FG--HFGVVTCMARSECNITSDCYIASGSADCTVLLWHWNARTQSIVGEGDVPTPRATLTGHEQA 3621
Fly 3622 VTSVVISAELGLVVSGSSNGPVLIHTTFGDL-----LRSLDPPAEFHSPELITMSRE--GFIVIN 3679
Fly 3680 YDK----GNVAAYTINGKKLRHETHNDNLQC-MLLSRDGEYL---MTAG--DRGIVEVWRTFNLA 3734
Fly 3735 PL--YAFPACNAGIRSLALTHDQKYLLAGLSTGSIIVFHIDFNRWHHEYQQR 3784 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rg | NP_001284879.1 | Laminin_G_3 | 210..358 | CDD:463865 | |
| DUF4704 | 629..1123 | CDD:464870 | 106/582 (18%) | ||
| PspC_subgroup_2 | <1433..1807 | CDD:468202 | 81/517 (16%) | ||
| DUF1088 | 2791..2972 | CDD:461925 | 43/255 (17%) | ||
| PH_BEACH | 2996..3093 | CDD:434260 | 22/105 (21%) | ||
| Beach | 3125..3401 | CDD:460459 | 132/289 (46%) | ||
| NBCH_WD40 | 3502..3774 | CDD:466575 | 70/294 (24%) | ||
| WD40 repeat | 3524..3560 | CDD:293791 | 6/37 (16%) | ||
| WD40 repeat | 3566..3617 | CDD:293791 | 12/50 (24%) | ||
| WD40 repeat | 3622..3657 | CDD:293791 | 9/39 (23%) | ||
| WD40 repeat | 3669..3699 | CDD:293791 | 8/35 (23%) | ||
| WD40 repeat | 3704..3739 | CDD:293791 | 12/42 (29%) | ||
| LYST | XP_011542333.1 | PH_BEACH | 3066..3171 | CDD:275391 | 22/110 (20%) |
| Beach | 3186..3476 | CDD:214982 | 133/290 (46%) | ||
| WD40 repeat | 3582..3619 | CDD:293791 | 6/36 (17%) | ||
| WD40 | 3583..3832 | CDD:475233 | 66/270 (24%) | ||
| WD40 repeat | 3623..3668 | CDD:293791 | 12/51 (24%) | ||
| WD40 repeat | 3673..3709 | CDD:293791 | 10/42 (24%) | ||
| WD40 repeat | 3716..3749 | CDD:293791 | 7/32 (22%) | ||
| WD40 repeat | 3759..3800 | CDD:293791 | 12/40 (30%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||