Sequence 1: | NP_001284879.1 | Gene: | rg / 44531 | FlyBaseID: | FBgn0266098 | Length: | 3785 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002937765.2 | Gene: | nbeal1 / 100494980 | XenbaseID: | XB-GENE-990549 | Length: | 2716 | Species: | Xenopus tropicalis |
Alignment Length: | 1174 | Identity: | 384/1174 - (32%) |
---|---|---|---|
Similarity: | 555/1174 - (47%) | Gaps: | 246/1174 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 2707 LTQKLEIALGPVCPLLREIMVDFAPFLSKTLVGSHGQELLM--EGKGLTTFKNSHSVVELVMLLC 2769
Fly 2770 -SQEWQNSLQKHAGLAF--IELINEGRLLSHAMKDHIVRVANEAEFI----LNRMRADDVLKHAD 2827
Fly 2828 FESQCAQTLLE-----RREEERMCDHLITAARRRDNVIASRLLEKVRNIMCNRHGAWGDSSSTSS 2887
Fly 2888 GGAIVGAVQKSPYWKLDAWEDDARRRKRMVQNPRGSSHPQATLKAALENGGPEDAILQTRDEFHT 2952
Fly 2953 QIAVSRTHPSGQHNGELLDDA-ELLIEDRELD-LDLTGPVNI-----------------STKARL 2998
Fly 2999 IAPGLVAPGTVSITSTEMFFEVDEEHPEFQKIDGEVLKYCDHLHG-----KWYFSEVRAIFSRRY 3058
Fly 3059 LLQNVALEIFLASRTSILFAFPDQHTVKKVIK----------ALPRVGVGIKYGIPQTRRASMMS 3113
Fly 3114 PRQLMRNSNMTQKWQRREISNFEYLMFLNTIAGRTYNDLNQYPIFPWVLTNYESKDLDLSLPSNY 3178
Fly 3179 RDLSKPIGALNPSRRAYFEERYESWDS--DTIPPFHYGTHYSTAAFTLNWLVRVEPFTTMFLALQ 3241
Fly 3242 GGKFDYPDRLFSSVSLSWKNCQRDTSDVKELIPEWYFLPEMFYNSSGYRLGH----REDGALVDD 3302
Fly 3303 IELPPWAKSPEEFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAIRATNVFYYLTYEGSVDL 3367
Fly 3368 DGVLDPVMREAVENQIRNFGQTPSQLLMEPHPPRSSAMHLSPMMFSAMPEDLCQMLKFYQNSPVI 3432
Fly 3433 HISANTYPQL-------------SLPSVVTVTAGHQFAVNRWNCNYTASVQSPSYAESPQSPGSN 3484
Fly 3485 QPL-TIDPVLAV--HG------TNNN----------SNAASRRHLGDNFSQMLKIRSNCFVTTVD 3530
Fly 3531 SRFLIACGFWDNSFRVFATETAKIVQIVFGHFGVVTCMARSECNITSDCYIASGSADCTVLLWHW 3595
Fly 3596 NARTQSIVGE--GDVPT-PRATLTGHEQAVTSVVISAELGLVVSGSSNGPVLIHT-TFGDLLRSL 3656
Fly 3657 DPPAE----FHSPELITMSREGFIVIN--------YDKGNVAAYTINGKKLRHETHNDNL--QCM 3707
Fly 3708 LLSRDGEYLMTAGDRGIVEVWRTF----NLAPLYAFPACNAGIRSLALTHDQKYLLAGLSTGSII 3768
Fly 3769 VFHI 3772 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rg | NP_001284879.1 | LamG | 210..358 | CDD:304605 | |
DUF4704 | 634..918 | CDD:292415 | |||
MARCKS | 1434..1751 | CDD:280269 | |||
DUF1088 | 2791..2972 | CDD:284000 | 41/189 (22%) | ||
PH_BEACH | 2996..3093 | CDD:291510 | 28/111 (25%) | ||
Beach | 3125..3401 | CDD:280327 | 163/281 (58%) | ||
WD40 repeat | 3524..3560 | CDD:293791 | 12/35 (34%) | ||
WD40 | <3526..3729 | CDD:295369 | 70/220 (32%) | ||
WD40 | <3530..3773 | CDD:225201 | 80/265 (30%) | ||
WD40 repeat | 3566..3617 | CDD:293791 | 15/53 (28%) | ||
WD40 repeat | 3622..3657 | CDD:293791 | 17/35 (49%) | ||
WD40 repeat | 3669..3699 | CDD:293791 | 13/37 (35%) | ||
WD40 repeat | 3704..3739 | CDD:293791 | 6/40 (15%) | ||
nbeal1 | XP_002937765.2 | DUF4704 | 888..1144 | CDD:374111 | |
DUF4800 | 1610..1863 | CDD:374334 | 59/260 (23%) | ||
PH_BEACH | 1914..2011 | CDD:275391 | 29/117 (25%) | ||
Beach | 2032..2311 | CDD:366934 | 163/281 (58%) | ||
WD40 | 2436..2705 | CDD:392136 | 80/265 (30%) | ||
WD40 repeat | 2472..2514 | CDD:293791 | 15/53 (28%) | ||
WD40 repeat | 2519..2556 | CDD:293791 | 18/36 (50%) | ||
WD40 repeat | 2564..2592 | CDD:293791 | 8/28 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |