DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2841 and Gab1

DIOPT Version :9

Sequence 1:NP_001284821.1 Gene:CG2841 / 44529 FlyBaseID:FBgn0003159 Length:1239 Species:Drosophila melanogaster
Sequence 2:XP_038953748.1 Gene:Gab1 / 361388 RGDID:1311085 Length:729 Species:Rattus norvegicus


Alignment Length:674 Identity:140/674 - (20%)
Similarity:223/674 - (33%) Gaps:229/674 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 DINETSQLEYNRITPVPAATSNAPFEQTFRI------------TVLLPKDQLFVA------RLGA 98
            ||...:..|.:.:.|: |::|.||.:..|.|            :|.||.....::      .||.
  Rat   118 DICGFNPTEEDPVRPL-ASSSQAPADSPFAINTAPASAHMEPSSVALPPSYQLISLPPHPDTLGL 181

  Fly    99 RV-PLSKLLSLVCDNKQLDADKYEFRS------------------PVDASQ-------------V 131
            |. |...||.:.|.:|:.:..:..|.|                  |..:||             |
  Rat   182 REDPQDYLLLINCQSKKPEPTRAHFDSAKPTSSETDCNDNVPSHKPPASSQGKHGMNGFFQQQMV 246

  Fly   132 YSCESTIGTVGLSEIRLCHKSESYDNFNPDVMHKFQRTGVARDS--------LSSSSDFSSSRHS 188
            |.|.....|....|..|.:...||.:   ||:.|...:....|.        ..:||..:..||.
  Rat   247 YDCPPPRVTSVSGESGLYNLPRSYSH---DVLPKESPSSTEADGELYVFNTPSGTSSVEAQMRHV 308

  Fly   189 KVTAKTPS------------PYSSSNSLNSMDSTGMNYTRTPVVVPPAKVLAPPPRKKRTAPRPP 241
            .::...|.            |..:....:.:|:       .|.|.||.     ||:...|..|.|
  Rat   309 SISYDIPPTPGNTYQVPRTFPEGTLGQSSKLDT-------IPDVPPPR-----PPKPHSTHDRSP 361

  Fly   242 SQVCIPEQSVPDIPAANSKSEPAYAVIVKRPQLCM--STPNLSGPLEL----------DCNGNGS 294
            .:.|       .:|...|.::.:|.:    |...|  |..|....::|          ||.....
  Rat   362 VETC-------GVPRTASDTDSSYCI----PPAGMPPSRSNTISTVDLNKLRKDAGSQDCYDIPR 415

  Fly   295 KSPDE--DSTDGHYATLDLKPPIAGG---------------PEPTPRKRLLQIKKKTAPAPPPDF 342
            ..|.:  .|.:|.:..|.:|..:|.|               |...||.......:   |...|::
  Rat   416 TFPSDRSSSLEGFHNQLKIKNVLAAGNVSGEELDENYVPMNPNSPPRHHPSSFAE---PIQEPNY 477

  Fly   343 QSGGDNISLASLPEPVTPTP--------NIPQPA-----------PRITTPLPIAPTANPPLAQV 388
                         .|:||..        .:|.||           ||  .|:|:|....||   |
  Rat   478 -------------VPMTPGTFDFSAFGMQVPPPAHLGFRSSPKTPPR--RPVPVADCEPPP---V 524

  Fly   389 NGNGNGSPNGNVSKVLLNRTPTPEPRSLGSATEDDDNDTASKQADSGIGEPAPSPSVSPEPEAEK 453
            :.|......|...|:|     .|:|..|    |..|:.|....|.....:|||. .:.|..|.|:
  Rat   525 DRNLKPDRKGQSPKIL-----RPKPHGL----ERTDSQTVGGFATRRKVKPAPL-EIKPLSEWEE 579

  Fly   454 SQ-------QESSSEDDEAIKVYNFKLCQTSKKPEPSAATLAELTALTAQDIEEEDNHVDQPASI 511
            .|       ..|.:.|.....:          .|.|.:   ...|..::...:.|:|:|....::
  Rat   580 LQAPVRSPITRSFARDSSRFPM----------SPRPDS---VHSTTSSSDSHDSEENYVPMNPNL 631

  Fly   512 TN--GNLATPSSETSLTSWNYLDPISPPPDFSDQQMQ----------------KRNAGSLSPGSP 558
            :|  .||...:|....:|     |::.|.  .|:|::                ::|:||   ||.
  Rat   632 SNEDQNLFCNNSLEGASS-----PMTKPK--GDKQVEYLDLDLESGKSTPPRKQKNSGS---GSS 686

  Fly   559 L-DEIVDELATIINQQRLDTLIKK 581
            : ||.||.:  :::||:  ||..|
  Rat   687 MSDERVDYV--VVDQQK--TLALK 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2841NP_001284821.1 Ehrlichia_rpt 372..958 CDD:118064 55/236 (23%)
Gab1XP_038953748.1 PH-like 30..130 CDD:418428 3/11 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3751
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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