Sequence 1: | NP_001259868.1 | Gene: | robo2 / 44522 | FlyBaseID: | FBgn0002543 | Length: | 1519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009293693.1 | Gene: | igsf9bb / 569554 | ZFINID: | ZDB-GENE-091112-15 | Length: | 1439 | Species: | Danio rerio |
Alignment Length: | 1463 | Identity: | 312/1463 - (21%) |
---|---|---|---|
Similarity: | 493/1463 - (33%) | Gaps: | 326/1463 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 192 RLEPANTRVAQGEVALMECGA--PRGSPEPQISWRKNGQTLNLVGN-------------KRIRIV 241
Fly 242 DGGNLAIQEARQSDDGRYQCVV----KNVVGTRESATAFLKVHVRP-FLIRGPQNQTAVVGSSVV 301
Fly 302 FQCRIGGDPLPDVLWRRTASGGNMPLRRVHVLEDRSLKLDDVTLEDMGEYTCEADNAVGGITATG 366
Fly 367 ILTVHAPPKFVIRPKNQLVEIGDEVLFECQANGHPRPTLY-WSVEGNSSLLLPGYRDGRMEVTLT 430
Fly 431 PEGRSVLSIARFAREDSGKVVTCNALNAVG---SVSSRTVVSVDTQFELPPPIIEQG---PVNQT 489
Fly 490 LPVKSIVVLPCRTLGTPVPQVSWYLDGIPIDVQEHERRNLSDAGALTISDLQRHEDE-GLYTCVA 553
Fly 554 SNRNGKSSWSGYLRLDTPTNPNI-----KFFRAPELSTYPGPPGKPQMV---EKGENSVTLSWTR 610
Fly 611 SNKVGGSSLVGYVI--------EMFGKNETDGWVAVGTRVQNTTFTQTGLLPGVNYFFLIRAENS 667
Fly 668 HGLSLPSPMSEPITVGTRYFNSGLDLS-----EARASLLSGDVVELSNASVVDSTSMKLT----W 723
Fly 724 QIINGKYVEGFYVYARQLPNPIVNNPAPVTSNTNPLLGSTSTSASASASASALISTKPNIAAAGK 788
Fly 789 RDGETNQSG--------GGAPTP---------LNTKYRMLTILNGGGASSCTITGLVQYTLYEFF 836
Fly 837 IVPFYKSVEGKPSN-SRIARTLEDVPSEAP---------YGMEALLLNSSAVFL----------K 881
Fly 882 WKAPELKDRHGVLLNYHVIVRGIDTAHNFSRILTNVTIDAASPTLVLANLTEGVMYTVGVAA--- 943
Fly 944 --GNNAGVGPYCVPATLRLDPITKRLDPFINQRYPINQDHVNDVLTQPWFIILLGAILAVLMLSF 1006
Fly 1007 GAMVFVKRKHM----MMKQSALN---TMRGNHTSDVLKMPSLSARNGNGYWLDSSTGGMVWRP-- 1062
Fly 1063 -SPGGDSLEMQKDHIADYAPVCGAPGSPAGGGTSSGGSGGAGSGASGGDDIHGGHGSERNQQRYV 1126
Fly 1127 GEYSNIPTDYAEVSSFGKAPSEYGRHGNASPAP-------YATSSILSPHQQQQQQQPRYQQRPV 1184
Fly 1185 PGYGLQRPM-HPHYQQQQHQQQQAQQTHQQHQALQQHQQLP---PS-----NIYQQMSTTSEIYP 1240
Fly 1241 TNTGPSRSVYSEQYYYPKDKQRHIHITENKLSNCHTYEAAPGAKQSSPIS-SQFASVRRQQLPPN 1304
Fly 1305 CSIGRESARFKVLNTDQGKNQQNLLDLDGSSMCYNGLADSGCG----GSPSPMAMLMSHEDEHAL 1365
Fly 1366 YHTADGDLDD-MERLYVKVDEQQPPQQQQQLIPLVPQHPAEGHLQSWRNQSTRSSRKNGQECIKE 1429
Fly 1430 P---------------SELIYAPGSVASERSLLSNSGSGTSSQPAGHNVXPLLP--------GSS 1471
Fly 1472 LGQSQSKSQSQSQSQSDLQSQEQLYAREVRELL 1504 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo2 | NP_001259868.1 | Ig1_Robo | 90..185 | CDD:143317 | |
I-set | 91..184 | CDD:254352 | |||
I-set | 190..279 | CDD:254352 | 21/105 (20%) | ||
Ig2_Robo | 193..279 | CDD:143201 | 20/104 (19%) | ||
I-set | 283..370 | CDD:254352 | 29/87 (33%) | ||
Ig | 300..370 | CDD:299845 | 22/69 (32%) | ||
Ig | 388..>457 | CDD:299845 | 19/69 (28%) | ||
I-set | 479..561 | CDD:254352 | 23/85 (27%) | ||
Ig | 496..561 | CDD:143165 | 18/65 (28%) | ||
FN3 | 588..681 | CDD:238020 | 18/103 (17%) | ||
FN3 | <817..856 | CDD:238020 | 9/39 (23%) | ||
fn3 | 864..952 | CDD:278470 | 17/111 (15%) | ||
igsf9bb | XP_009293693.1 | IG_like | 30..113 | CDD:214653 | 17/82 (21%) |
Ig | 41..113 | CDD:143165 | 14/71 (20%) | ||
IG_like | 144..223 | CDD:214653 | 27/80 (34%) | ||
IGc2 | 151..208 | CDD:197706 | 20/58 (34%) | ||
I-set | 227..319 | CDD:254352 | 29/97 (30%) | ||
Ig | <263..319 | CDD:299845 | 16/61 (26%) | ||
Ig_2 | 326..414 | CDD:290606 | 26/105 (25%) | ||
IG_like | 329..403 | CDD:214653 | 23/84 (27%) | ||
IG_like | 424..504 | CDD:214653 | 16/89 (18%) | ||
Ig | 440..504 | CDD:299845 | 13/72 (18%) | ||
FN3 | 509..604 | CDD:238020 | 21/94 (22%) | ||
FN3 | 620..704 | CDD:238020 | 16/88 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |