Sequence 1: | NP_001259868.1 | Gene: | robo2 / 44522 | FlyBaseID: | FBgn0002543 | Length: | 1519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_689255.3 | Gene: | robo4 / 560765 | ZFINID: | ZDB-GENE-020809-1 | Length: | 1134 | Species: | Danio rerio |
Alignment Length: | 1559 | Identity: | 312/1559 - (20%) |
---|---|---|---|
Similarity: | 480/1559 - (30%) | Gaps: | 689/1559 - (44%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 QC-------LTNESEIQIKIKSKIKNKTASEIKRRHRNNRDFHGERLKIMPVDRSRRAVFPLLLL 73
Fly 74 LAGLNGLTQVGALKGENPRIIEHPMDTTVPKNDPFTFNCQAEGNPTPTIQWFKDGREL---KTDT 135
Fly 136 GSHRIMLPAGGLFFLKVIHSRR-ESDAGTYWCEAKNEFGVARSRNATLQVAFLRDEFRLEPANTR 199
Fly 200 VAQGEVALMECGAPRGSPEPQISWRKNGQTLNLVGNKRIRIVDGGNLAIQEARQSDDGRYQCVVK 264
Fly 265 NVVGTRESATAFLKVHVRPFLIRGPQNQTAVVGSSVVFQCRIGGDPLPDVLWRRTASGGNMPLRR 329
Fly 330 VHVLEDRSLKLDDVTLEDMGEYTCEADNAVGGITATGILTVHAPPKFVIRPKNQLVEIGDEVLFE 394
Fly 395 CQANGHPRPTLYWSVEGNSSLLLPGYRDGRMEVTLTPEGRSVLSIARFAREDSGKVVTCNALNAV 459
Fly 460 GSVSSRTVVSVDTQFELPPPIIEQGPVNQTLPVKSIVVLPCRTLGTPVPQVSWYLDGIPIDVQEH 524
Fly 525 ERRNLSDAGALTISDLQRHEDEGLYTCVASNRNGKSSWSGYLRLDTPTNPNIKFFRAPELSTYPG 589
Fly 590 PPGKPQMVEKGENSVTLSWTRSNKVGGSSLVGYVIEMFGKNETDGWVAVGTRVQNTTFTQTGLLP 654
Fly 655 GVNYFFLIRAENSHGLSLPSPMSEPITVGTRYFNSGLDLSEARASLLSGDVVELSNASVVDSTSM 719
Fly 720 KLTWQIINGKYVEGFYVYARQLPNPIVNNPAPVTSNTNPLLGSTSTSASASASASALISTKPNIA 784
Fly 785 AAGKRDGETNQSGGGAPTPLNTKYRMLTILNGGGASSCTITGLVQYTLYEFFIVPFYKSVEGKPS 849
Fly 850 NSRIARTLEDVPSEAPYGMEALL--LNSSAVFLKWKAPELKDRHGVLLNYHVIVRGIDTAHNFSR 912
Fly 913 ILTNVTIDAASPTLVLANLTEGVMYTVGVAAGNNAGVGPYCVPATLRLDPITKRLDPFINQRYPI 977
Fly 978 NQDHVNDVLTQPWFIILLGAIL-AVLMLSFGAMVFVKRKHMMM-----KQSALNTMRGNHTSDVL 1036
Fly 1037 KMPSLSARNG---NGYWLDSSTG----GMVWRPSPGGDSLE-------MQKD--HIADYAPV--- 1082
Fly 1083 -CGAPGSPAGGGTSSGGSGGAGSGASGGDDIHGGHGSERNQQRYVGEYSNIPTDYAEVSSFG-KA 1145
Fly 1146 PSEYGR-----HGNASPAPYATSSILSPHQQQQQQQPRYQQRPVPGYGLQRPMHPHYQQQQHQQQ 1205
Fly 1206 QAQQTHQQHQALQQHQQLPPSNIYQQMSTTSEIYPTNTGPSRSVYSEQYYYPKDKQRHIHITENK 1270
Fly 1271 LSNCHTYEAAPGAKQSSPISSQFASVRRQQLPPNCSIGRESARFKVLNTDQGKNQQNLLDLDGSS 1335
Fly 1336 MCYNGLADSGCGGSPSPMAMLMSHEDEHALYHTADGDLDDMERLYVKVDEQQPPQQQQQLIPLVP 1400
Fly 1401 QHPAE-GHLQSWRNQSTRSSRKNGQECIKEPSELIYAPGSVASERSLLSNSG-----SGTSSQPA 1459
Fly 1460 GHNVXPLLPG---------------------SSLGQSQ-----SKSQSQSQSQSDLQSQEQLYA 1497 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo2 | NP_001259868.1 | Ig1_Robo | 90..185 | CDD:143317 | 46/98 (47%) |
I-set | 91..184 | CDD:254352 | 46/96 (48%) | ||
I-set | 190..279 | CDD:254352 | 34/88 (39%) | ||
Ig2_Robo | 193..279 | CDD:143201 | 32/85 (38%) | ||
I-set | 283..370 | CDD:254352 | 31/86 (36%) | ||
Ig | 300..370 | CDD:299845 | 25/69 (36%) | ||
Ig | 388..>457 | CDD:299845 | 0/68 (0%) | ||
I-set | 479..561 | CDD:254352 | 5/81 (6%) | ||
Ig | 496..561 | CDD:143165 | 5/64 (8%) | ||
FN3 | 588..681 | CDD:238020 | 11/92 (12%) | ||
FN3 | <817..856 | CDD:238020 | 9/38 (24%) | ||
fn3 | 864..952 | CDD:278470 | 24/89 (27%) | ||
robo4 | XP_689255.3 | Ig1_Robo | 70..169 | CDD:143317 | 46/103 (45%) |
I-set | 71..168 | CDD:254352 | 46/96 (48%) | ||
I-set | 175..261 | CDD:254352 | 34/87 (39%) | ||
Ig2_Robo | 177..261 | CDD:143201 | 32/85 (38%) | ||
I-set | 265..350 | CDD:254352 | 31/101 (31%) | ||
Ig | 282..350 | CDD:299845 | 25/84 (30%) | ||
FN3 | 373..448 | CDD:214495 | 29/237 (12%) | ||
FN3 | 472..560 | CDD:238020 | 24/92 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 81 | 1.000 | Domainoid score | I8418 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4222 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.860 |