DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment robo2 and tutl

DIOPT Version :10

Sequence 1:NP_001259868.1 Gene:robo2 / 44522 FlyBaseID:FBgn0002543 Length:1519 Species:Drosophila melanogaster
Sequence 2:NP_001303307.1 Gene:tutl / 46015 FlyBaseID:FBgn0010473 Length:1536 Species:Drosophila melanogaster


Alignment Length:1679 Identity:353/1679 - (21%)
Similarity:523/1679 - (31%) Gaps:566/1679 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KNKTASEIK---------RRHRNNRDFHGERLKIMPVDRSRRAV---------FPLLLLLAGLNG 79
            |..|||..|         ||.|:.|...|..: .:|:.|.:.:.         |.|:.|||.|  
  Fly    61 KTLTASPAKTAAFTVKTTRRRRSRRRAEGSSI-CVPIRRGQGSTPTPTIQVLQFVLVSLLALL-- 122

  Fly    80 LTQVGALKGENPRIIEHPMDTTVPKNDPFTFNCQAE---GNPTP-TIQWFKDGRELKTDT----- 135
                 |...:...|.|..:..|....:...|||..|   .:|.| .:||.|...|..:|.     
  Fly   123 -----AKNAQAHNIPEDAVHITAILGEGVIFNCHVEFPNDHPVPYVLQWDKKVSETGSDLPIYIW 182

  Fly   136 -------------------------GSHRIMLPAGGLFFLKVIHSRRESDAGTYWCEAKNEFGVA 175
                                     ||..:.|.           :.||||.|.|.|         
  Fly   183 YESYPEHIEEGYKGRVSRVSQDSPFGSASLNLT-----------NIRESDQGWYEC--------- 227

  Fly   176 RSRNATLQVAFL-RD------------------EFRLEPAN-TRVAQGEVALMECGAPRGSPEPQ 220
                   :|.|| ||                  .|.:.|.: ..|..|:..::.|.|. |:|.|:
  Fly   228 -------KVVFLNRDPKQHKNGTWFHLDVHAPPRFSVTPEDIIYVNLGDSIILNCQAD-GTPTPE 284

  Fly   221 ISWRKNGQTLN---LVG--NKRIRIVDGGNLAIQEARQSDDGRYQCVVKNVVGTRESATAFLKVH 280
            |.|.|:...::   .||  |      ||..|.|...|..|.|.|.|:.:|..| :.|.||.:.:.
  Fly   285 ILWYKDANPVDPSPTVGIFN------DGTELRISTIRHEDIGEYTCIARNGEG-QVSHTARVIIA 342

  Fly   281 VRPFLIRGPQNQTAVVGSSVVFQCRIGGDP-LPDVLWRRTASGGNMPLRRVHVLE-------DRS 337
            ....::..|.|||.:.|..|:|.|.....| ...|.|.|..|    |:|.|..||       |.|
  Fly   343 GGAVIMVPPTNQTKLEGEKVIFSCEAKAMPGNVTVRWYREGS----PVREVAALETRVTIRKDGS 403

  Fly   338 LKLDDVTLEDMGEYTCEADNAVGG-ITATGILTVHAPPKFVIRPKNQLVEIGDEVLFECQANGHP 401
            |.::.:..:|.|:|.||..|.:|. .:|:..|:|..|.|....|..|.:......:.:|.....|
  Fly   404 LIINPIKPDDSGQYLCEVTNGIGDPQSASAYLSVEYPAKVTFTPTVQYLPFRLAGVVQCYIKSSP 468

  Fly   402 RPTLYWSVEGNSSLLLPGYRDGRMEVTLTPEGRSVLSIARFAREDSGKVVTCNALNAVGSVSSRT 466
            :  |.:........||..|:  ..::.:...|.  |...|...|..|: ..|...||.|:..:..
  Fly   469 Q--LQYVTWTKDKRLLEPYQ--MKDIVVMANGS--LLFTRVNEEHQGQ-YACTPYNAQGTAGASG 526

  Fly   467 VVSV----DTQFELPPPIIEQGPVNQTLPVKSIVVLPCRTL---GTPVPQVSWY-LDGIPIDVQE 523
            |:.|    ...|.:.|..:.|..|..:      |.:.|..|   ||..|.:.|. .:|..:...:
  Fly   527 VMDVLVRKPPAFTVEPETLYQRKVGDS------VEMHCDALEAEGTERPTIKWQRQEGEQLTESQ 585

  Fly   524 HERRNLSDAGALTISDLQRHEDEGLYTCVASNRNGKSSWSGYLRLDTPTNPNIKFFRAPELSTYP 588
            ..|..:| .|.:||.:|:| ||.|.|.||.||.        ...|...|...|:       .|.|
  Fly   586 RNRIKIS-GGNITIENLRR-EDFGYYQCVVSNE--------VATLMAVTQLVIE-------GTQP 633

  Fly   589 GPP----GKPQMVEKGENSVTLSWTRSNKVGGSSLVGYVIEMFGKNETDGWVAVG-TRVQNTTFT 648
            ..|    ||..     |:|:||.|......|......|.| .|.:...:.|..:. |...:|..|
  Fly   634 HAPYNITGKAT-----ESSITLQWLPGYSGGSEYKQDYTI-WFREAGVNDWQTISVTPSGSTQVT 692

  Fly   649 QTGLLPGVNYFFLIRAENSHGLSLPSPMSEPITVGTRYFNSGLDLSEARASLLSGDVVELSNASV 713
            ..||..|..|.|.:...|..|..:   ||:.:||.|        |.:|.|:              
  Fly   693 INGLASGTTYEFQVVGRNVLGDGM---MSKVMTVRT--------LEDAPAA-------------- 732

  Fly   714 VDSTSMKLTWQIINGKYVEGFYVYARQLPNPIVNNPAPVTSNTNPLLGSTSTSASASASASALIS 778
                                               |..|.:.|.|              ..:...
  Fly   733 -----------------------------------PRNVKAATQP--------------PDSFFQ 748

  Fly   779 TKPNIAAAGKRDGETNQSGGGAPTPLNTKYRMLTILNGGGASSCTITGLVQYTLYEFFIVPFYKS 843
            ..|:.|                                              .|..:|.:.|:..
  Fly   749 LMPDEA----------------------------------------------DLLAYFDIYFHTD 767

  Fly   844 VEG----KPSNSRIARTLEDVPSEAPYGMEALLLNSSAVFLKWKAPELKDRHGVLLNYHVIVRGI 904
            ..|    .|...|:..     |...|....::...|:...:.|::| |:..|  ::.::.|....
  Fly   768 SRGTLVYSPPKLRVKG-----PKPGPPRNVSVTEVSNGFLITWQSP-LERAH--IVKFYTIKYRT 824

  Fly   905 DTAHNFSRILTNVTIDAASPTLVLANLTEGVMYTVGVAAGN-----NAGVGPYCVPATLRLDPIT 964
            |...   :.|....|.......::.||..|..|...|.|.:     ::....:.|||.::...||
  Fly   825 DAQW---KTLNRGQIRPEETQYLVKNLVGGRTYYFRVLANSEKSYESSDEVKFPVPARVKHKAIT 886

  Fly   965 KRLDPFINQRYPINQDHVNDVLTQPWFIILLGAILAVLMLSFGAMVFVKRKHMMMKQSALNTMRG 1029
            ..:              |..:|   :||:       .::||..|:....::....::...|.:..
  Fly   887 AGV--------------VGGIL---FFIV-------AIILSVCAVKICNKRKRRKQEKEFNMVAC 927

  Fly  1030 NHTSDVLKMPSLSARN---GNGYWLDSSTGGM----------------------------VWRPS 1063
            ..|         .|||   .|.:..:.|||.:                            :|.| 
  Fly   928 RIT---------DARNIAANNHHLHNRSTGSISSGQVPLKKYKQTRISSLTAILIAILHWIWPP- 982

  Fly  1064 PGGDSLEMQKDHIADYAPVCGAPGSPAGGGTSSGGSGGAGSGASGGDDIHGGHGSERN----QQR 1124
                      |...:...:..:|                  ....||:..||.|..|:    |:.
  Fly   983 ----------DRCTNCHSIYSSP------------------NLEDGDEDDGGGGRRRSVSRIQRS 1019

  Fly  1125 YVGEYSNIPTDYAEVSSFGKAPS--EYG------------RHGNASPAPYATSSILSPHQQQQQQ 1175
            ..|.:   ..|...||..|.:..  |.|            |:.|.|             |:....
  Fly  1020 LDGRF---VLDVEGVSKLGYSQQTLESGNVDVVDGGLFERRNSNVS-------------QKSSSD 1068

  Fly  1176 QPRYQQRP---VPGYGLQRPMHPHYQQQQHQQQQAQQTHQQHQAL----QQHQQLPP-SNIYQQM 1232
            ...:..|.   ......:||:... ..|...|..|.......|.|    .:...:|| |..|...
  Fly  1069 DGGFLSRRNFITARASWRRPLVAS-SSQLSLQSAADSARGFLQGLLKIGAKQSAVPPNSQSYFDE 1132

  Fly  1233 STTSEIYPTNTGPSRSVYSEQYYYPKDKQRHIHITENKLSNCHTYEAAPGAKQS----SPISSQF 1293
            :.:...|.....|..|  |...|...|:.|.:||        :|...:...:|.    |.||..|
  Fly  1133 AVSGARYQNVLRPYTS--SNNLYGNADRSRPLHI--------NTISGSLSQQQQLYTPSRISRIF 1187

  Fly  1294 ASVRRQQLPPNCSIGRESARFKVLNTDQGKNQQNLLDLDGSSMCYNGLADSGCGGSPSPMAMLMS 1358
            :| ..|||.|:                   :||.||...||.......:|......|: .|...|
  Fly  1188 SS-SPQQLQPH-------------------HQQLLLSSGGSGAYPTHFSDLSTVYPPN-SAERSS 1231

  Fly  1359 HEDEHALYHTADGDLDDMERLYVK-------VDEQQPPQQQQQLIPLVPQHPAEGH---LQ---- 1409
            |            :|....|.|.:       :.|:...||||:      |||.|.|   ||    
  Fly  1232 H------------NLSSRYRYYSQELPSLRTIQEETRRQQQQK------QHPLEDHFVPLQLPSP 1278

  Fly  1410 -SWRN--QS-------TR----------SSRKNGQECIKEPSEL------IYAPGSV-ASERSLL 1447
             |||:  ||       ||          |:|:...|.:....:|      ...||.: ||..|..
  Fly  1279 PSWRSYYQSQASYRPRTRWYPRHHSRLFSNRQQQHEMLSPLPQLNLNLRNSMNPGGLEASPESRS 1343

  Fly  1448 SNSGSG---TSSQPAGHNVXPLLP-----------GSSLGQSQSKSQSQSQSQS 1487
            |:||.|   ||:.|...:. .|||           ....|..|::.|:...|.|
  Fly  1344 SSSGFGSKNTSNHPGSTSEWRLLPPYRAPPSPPKHSGYFGGQQAQGQTPHGSYS 1397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
robo2NP_001259868.1 IgC_1_Robo 91..185 CDD:409490 24/127 (19%)
Ig strand A 91..95 CDD:409490 1/3 (33%)
Ig strand A' 98..103 CDD:409490 1/4 (25%)
Ig strand B 107..115 CDD:409490 3/7 (43%)
Ig strand C 121..126 CDD:409490 2/4 (50%)
Ig strand C' 129..131 CDD:409490 0/1 (0%)
Ig strand D 139..142 CDD:409490 0/2 (0%)
Ig strand E 145..151 CDD:409490 0/5 (0%)
Ig strand F 162..170 CDD:409490 3/7 (43%)
Ig strand G 173..185 CDD:409490 0/11 (0%)
IgI_2_Robo 192..279 CDD:409389 28/92 (30%)
Ig strand A 192..195 CDD:409389 0/2 (0%)
Ig strand A' 197..201 CDD:409389 0/4 (0%)
Ig strand B 205..212 CDD:409389 1/6 (17%)
Ig strand C 220..225 CDD:409389 2/4 (50%)
Ig strand C' 227..230 CDD:409389 0/2 (0%)
Ig strand D 237..241 CDD:409389 0/3 (0%)
Ig strand E 244..250 CDD:409389 2/5 (40%)
Ig strand F 257..265 CDD:409389 3/7 (43%)
Ig strand G 268..279 CDD:409389 4/10 (40%)
Ig 286..370 CDD:472250 30/92 (33%)
Ig strand B 300..304 CDD:409353 2/3 (67%)
Ig strand C 313..317 CDD:409353 1/3 (33%)
Ig strand E 336..340 CDD:409353 2/3 (67%)
Ig strand F 350..355 CDD:409353 2/4 (50%)
Ig strand G 363..366 CDD:409353 1/2 (50%)
Ig_3 373..457 CDD:464046 16/83 (19%)
Ig 480..566 CDD:472250 25/89 (28%)
Ig strand B 496..500 CDD:409353 1/3 (33%)
Ig strand C 509..513 CDD:409353 0/3 (0%)
Ig strand E 533..537 CDD:409353 1/3 (33%)
Ig strand F 548..553 CDD:409353 2/4 (50%)
Ig strand G 561..564 CDD:409353 0/2 (0%)
COG3979 586..>800 CDD:443178 39/218 (18%)
FN3 588..681 CDD:238020 26/97 (27%)
fn3 864..952 CDD:394996 16/92 (17%)
tutlNP_001303307.1 V-set 138..250 CDD:462230 27/138 (20%)
I-set 253..341 CDD:400151 29/95 (31%)
Ig strand B 271..275 CDD:409353 0/3 (0%)
Ig strand C 284..288 CDD:409353 1/3 (33%)
Ig strand E 308..311 CDD:409353 1/2 (50%)
Ig strand F 321..326 CDD:409353 2/4 (50%)
Ig strand G 334..337 CDD:409353 1/2 (50%)
Ig 346..437 CDD:472250 30/94 (32%)
Ig strand B 362..366 CDD:409353 2/3 (67%)
Ig strand C 376..380 CDD:409353 1/3 (33%)
Ig strand E 402..406 CDD:409353 2/3 (67%)
Ig strand F 416..421 CDD:409353 2/4 (50%)
Ig strand G 430..433 CDD:409353 1/2 (50%)
Ig <459..530 CDD:472250 16/77 (21%)
Ig strand B 459..462 CDD:409353 0/2 (0%)
Ig strand C 471..476 CDD:409353 0/4 (0%)
Ig strand E 496..500 CDD:409353 2/5 (40%)
Ig strand F 510..515 CDD:409353 1/5 (20%)
Ig strand G 523..526 CDD:409353 0/2 (0%)
Ig_3 535..615 CDD:464046 25/87 (29%)
FN3 633..725 CDD:238020 28/100 (28%)
FN3 786..874 CDD:238020 16/93 (17%)

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