DRSC/TRiP Functional Genomics Resources

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Protein Alignment robo2 and zgc:77784

DIOPT Version :10

Sequence 1:NP_001259868.1 Gene:robo2 / 44522 FlyBaseID:FBgn0002543 Length:1519 Species:Drosophila melanogaster
Sequence 2:XP_073778998.1 Gene:zgc:77784 / 402947 ZFINID:ZDB-GENE-040426-1874 Length:1387 Species:Danio rerio


Alignment Length:1480 Identity:444/1480 - (30%)
Similarity:667/1480 - (45%) Gaps:255/1480 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 LKGENPRIIEHPMDTTVPKNDPFTFNCQAEGNPTPTIQWFKDGRELKTDTG---SHRIMLPAGGL 147
            |:...|||:|.|.|..|.|.:|.|.||:|||.|.||:||:|||..::||..   |||::||:|.|
Zfish    77 LEDSPPRIVEDPSDLIVSKGEPATLNCKAEGRPAPTVQWYKDGEHVETDKDDPRSHRMLLPSGSL 141

  Fly   148 FFLKVIHSRR-ESDAGTYWCEAKNEFGVARSRNATLQVAFLRDEFRLEPANTRVAQGEVALMECG 211
            |||:::|.|| :.|.|.|.|.|:|..|.|.||||:|:||.|||:||..|.:..||.||.|:::|.
Zfish   142 FFLRIVHGRRSKPDEGVYTCVARNYLGEAVSRNASLEVAILRDDFRQPPNDVVVAAGEPAVLDCV 206

  Fly   212 APRGSPEPQISWRKNGQTLNLVGNKRIRI-VDGGNLAIQEARQSDDGRYQCVVKNVVGTRESATA 275
            .|||.|||.:||::|...   |.:|..|| :.||.|.|...|:||.|.|.||..|:||.|:|..|
Zfish   207 PPRGHPEPTVSWKRNNVR---VSDKDGRISMRGGKLIISHTRKSDAGMYVCVGTNMVGERDSDPA 268

  Fly   276 FLKVHVRPFLIRGPQNQTAVVGSSVVFQCRIGGDPLPDVLWRRTASGGNMPLRRVHVLEDRSLKL 340
            .|.|..||..||.|.||..:...||.|.|.:.|||.|.|.|.|  ..|.:|..|..:..|.||.|
Zfish   269 ELVVFERPVFIRRPVNQIVLAEESVDFLCEVHGDPAPTVRWNR--DQGELPRGRFEIRSDNSLHL 331

  Fly   341 DDVTLEDMGEYTCEADNAVGGITATGILTVHAPPKFVIRPKNQLVEIGDEVLFECQANGHPRPTL 405
            ..|..||.|.|||..:|:||...|:.:|.||.||:..:||.:|:...|..|.|:|...|:|.|.:
Zfish   332 TRVRAEDEGTYTCVTENSVGKTEASAVLQVHVPPQIDVRPLDQVAVQGRTVTFQCGTQGNPLPAV 396

  Fly   406 YWSVEGNSSLLLPGY---RDGRMEVTLTPEGRSVLSIARFAREDSGKVVTCNALNAVGSVSSRTV 467
            :|..||:..||.||.   :.||..|:::.|    |||:....||||..: |.|::..||:.::.:
Zfish   397 FWQKEGSQMLLFPGQPPSQSGRYSVSMSGE----LSISDVHSEDSGYYI-CQAISVAGSIIAKAL 456

  Fly   468 VSVDT-QFELPPPIIEQGPVNQTLPVKSIVVLPCRTLGTPVPQVSWYLDG--IPIDVQEHERRNL 529
            :.|:. ..:|.||||.:||.||||.:.|...|.|..:|:|:|.|.|..||  ||.| ..|.|  |
Zfish   457 LEVEAGPSDLVPPIIRRGPANQTLALGSSAQLQCHVMGSPMPGVRWEKDGRSIPSD-DIHIR--L 518

  Fly   530 SDAGALTISDLQRHEDEGLYTCVASNRNGKSSWSGYLRLDTPTNPNIKFFRAPELSTYPGPPGKP 594
            .:.|.|.||.: :..|.|.||||||:...::||||.:.:....:.:::  |..:....||||.||
Zfish   519 MENGTLHISGV-KDTDSGTYTCVASSGTSETSWSGTVTVKASGSSSVQ--RVSQSLQLPGPPLKP 580

  Fly   595 QMVEKGENSVTLSWTRSNKVGGSSLVGYVIEMFGKNETDGWVAVGTRVQNTTFTQTGLLPGVNYF 659
            .:.:...:||||:|..:...||:::..|:||.|.::....|..|...|:....|.:||.|...|.
Zfish   581 VVTDVTSSSVTLTWQPNPHEGGAAVTSYIIEAFSQSVGSTWQTVADLVKQEKHTVSGLYPNTVYL 645

  Fly   660 FLIRAENSHGLSLPSPMSEPITVGTRYFNSGLDLSEARASLLSGDVVELSNASVVDSTSMKLTWQ 724
            |:|||.||:|||.|||:|||:.........|.|.:..:.. |.|..|.|....|:..||:::||.
Zfish   646 FIIRAVNSYGLSDPSPISEPVRTQDGPEGQGKDQAHVQMD-LGGVKVRLQTPEVLSPTSVQITWT 709

  Fly   725 I-INGKYVEGFYVYARQLPNPIVNNPAPVTSNTNPLLGSTSTSASASASASALISTKPNIAAAGK 788
            : .:.:|::|:.::.|           ||        |||.......|.                
Zfish   710 LDRHPRYIQGYRLFYR-----------PV--------GSTWMFQDIKAG---------------- 739

  Fly   789 RDGETNQSGGGAPTPLNTKYRMLTILNGGGASSCTITGLVQYTLYEFFIVPFYKSVEGKPSNSRI 853
                          ||:|  .:||.|:||..             ||..:.|:|...:|..|...:
Zfish   740 --------------PLHT--AVLTELHGGKE-------------YELKMRPYYNEFQGIDSEIIM 775

  Fly   854 ARTLEDVPSEAPYGMEAL-LLNSSAVFLKWKAPELKDRHGVLLNYHVIVRGIDTAHNFSRILTNV 917
            .||..:|....|.|:..: |.|||.|.:.|:.|.......::|.|.|...|     |.|:.:.|.
Zfish   776 IRTPHEVLCGPPQGVSVVQLSNSSTVRVSWQPPPPDVPEELILEYRVWCVG-----NESQQVLNR 835

  Fly   918 TIDAASPTLVLANLTEGVM----YTVGVAAGNNAGVGPYCVPATLRLDPITKRLDPFINQRYPIN 978
            |:|..    :|..:.:|:|    |.|.|||..:||||.|..|.             ||..:..|:
Zfish   836 TVDGD----ILWVMLDGLMAESGYRVQVAAVTSAGVGVYSPPV-------------FIFLKVAID 883

  Fly   979 Q-------------DHVNDVLTQPWFIILLGAILAVLMLSFGAMVFVKRKHMMMKQSALNTMRGN 1030
            |             :.:..|:.||.||..:|....::::.|.|.::.  :|...|:      .|:
Zfish   884 QSLSVVKDDSVSLSEQITGVVRQPAFIAGIGVSSWMVLMGFSAWIYC--RHRRRKE------LGH 940

  Fly  1031 HTSDVLKMPSLSARNGNGYWLDSSTGGMVWRPSPGGDSLEMQKDHIADYAPVCGAPGSPAGGGTS 1095
            :|:.....|:::...|:|  .|...|    ||.       :.:.|:.:|..:  |...|.|..:.
Zfish   941 YTTSFAYTPAVALSRGDG--SDLING----RPC-------LLESHLGNYPWL--ADSWPTGNFSR 990

  Fly  1096 SG-GSGGAGSGASGGDDIHGGHGSERNQQRYVGEY---SNIPTDYAEVSSFGKAPSEYGRHGNAS 1156
            :| .|....:|.....|.:.......|.....|:|   ||....|..::     |::...|...|
Zfish   991 NGKDSVNCCAGRLDSTDQYYNTSGFSNYVSQNGKYSPSSNEGAIYCTIN-----PADADGHDLCS 1050

  Fly  1157 -----PAPYATSSILSPHQQQQQQQPRYQ---QRPVPG--YG-LQRPMHPHYQ--QQQHQQQQAQ 1208
                 |.||.::.:||.......:|...|   |....|  |. ||.|..|:.:  :|:...|.:.
Zfish  1051 MYSQGPDPYTSTPVLSKTDLYSMEQDLDQWSLQSSHSGAEYAKLQYPRGPNGKLVKQKSPGQSSS 1115

  Fly  1209 QTHQQ----HQALQQHQQLPPSNIYQQMSTTSEIYPTNTGPSRSVYSEQYYYPKDKQRHIHITEN 1269
            .|...    |.|..:..|:|          .....|.:.|.......|:.|..:|... :.:...
Zfish  1116 PTWSDVLSLHSAQNKEVQIP----------DKRHSPEDDGEWCPPLPERTYLIEDAAT-LPLRGE 1169

  Fly  1270 KLSNCHTYEAAPGAKQS------SPISSQFASVRRQQLP------PNCSIGRESARFKVLNTDQG 1322
            :.|...||     :.||      ||...|..:..|||.|      |.||   .:.:|.:.|....
Zfish  1170 ESSRATTY-----SLQSTVTLTPSPSDEQHPANPRQQHPDLLPWKPQCS---HNTQFALSNPKPF 1226

  Fly  1323 KNQQNLLDLDGSSMCYNG----LAD-----SGCGGS----------PSPMAMLMSHEDEHALYHT 1368
            ...::   ::||:..::|    :|:     ||...:          ..|.....||:|..|....
Zfish  1227 AKTES---VNGSAPHHSGPWRDMAEMEELFSGSTATREYTSFTSSIHKPRPKKKSHKDGLARREV 1288

  Fly  1369 A-DGDLDDMERLYVKVDEQQPPQQQQQLIPLVPQHPAEGHLQSWRNQSTRSSRKNGQECIKEPSE 1432
            : .|:|..        ..:.||..::.|..|......||...:.:::..||.||...:...:..:
Zfish  1289 SKSGNLPP--------PPEPPPLTEEPLKHLTDILDTEGSRTTPQHRERRSDRKTAAQWSTQDED 1345

  Fly  1433 LI-YAPGSVASERSLLSNSGSGTSSQPAGHNVXPLLPGSSLGQSQSKSQS 1481
            || |...::.|....||.|.:..||..:          .|||..:.::::
Zfish  1346 LIQYFKANLLSRNCSLSRSSASQSSASS----------RSLGSGRRRNEN 1385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
robo2NP_001259868.1 IgC_1_Robo 91..185 CDD:409490 51/97 (53%)
Ig strand A 91..95 CDD:409490 3/3 (100%)
Ig strand A' 98..103 CDD:409490 1/4 (25%)
Ig strand B 107..115 CDD:409490 4/7 (57%)
Ig strand C 121..126 CDD:409490 3/4 (75%)
Ig strand C' 129..131 CDD:409490 0/1 (0%)
Ig strand D 139..142 CDD:409490 1/2 (50%)
Ig strand E 145..151 CDD:409490 4/5 (80%)
Ig strand F 162..170 CDD:409490 4/7 (57%)
Ig strand G 173..185 CDD:409490 7/11 (64%)
IgI_2_Robo 192..279 CDD:409389 39/87 (45%)
Ig strand A 192..195 CDD:409389 1/2 (50%)
Ig strand A' 197..201 CDD:409389 0/3 (0%)
Ig strand B 205..212 CDD:409389 2/6 (33%)
Ig strand C 220..225 CDD:409389 2/4 (50%)
Ig strand C' 227..230 CDD:409389 0/2 (0%)
Ig strand D 237..241 CDD:409389 2/4 (50%)
Ig strand E 244..250 CDD:409389 3/5 (60%)
Ig strand F 257..265 CDD:409389 4/7 (57%)
Ig strand G 268..279 CDD:409389 5/10 (50%)
Ig 286..370 CDD:472250 35/83 (42%)
Ig strand B 300..304 CDD:409353 2/3 (67%)
Ig strand C 313..317 CDD:409353 1/3 (33%)
Ig strand E 336..340 CDD:409353 2/3 (67%)
Ig strand F 350..355 CDD:409353 3/4 (75%)
Ig strand G 363..366 CDD:409353 1/2 (50%)
Ig_3 373..457 CDD:464046 32/86 (37%)
Ig 480..566 CDD:472250 40/87 (46%)
Ig strand B 496..500 CDD:409353 1/3 (33%)
Ig strand C 509..513 CDD:409353 1/3 (33%)
Ig strand E 533..537 CDD:409353 2/3 (67%)
Ig strand F 548..553 CDD:409353 3/4 (75%)
Ig strand G 561..564 CDD:409353 2/2 (100%)
COG3979 586..>800 CDD:443178 60/214 (28%)
FN3 588..681 CDD:238020 40/92 (43%)
fn3 864..952 CDD:394996 30/92 (33%)
zgc:77784XP_073778998.1 None

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