DRSC/TRiP Functional Genomics Resources

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Protein Alignment robo2 and Prtg

DIOPT Version :9

Sequence 1:NP_001259868.1 Gene:robo2 / 44522 FlyBaseID:FBgn0002543 Length:1519 Species:Drosophila melanogaster
Sequence 2:NP_001032740.2 Gene:Prtg / 315806 RGDID:1307157 Length:1193 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
robo2NP_001259868.1 Ig1_Robo 90..185 CDD:143317
I-set 91..184 CDD:254352
I-set 190..279 CDD:254352
Ig2_Robo 193..279 CDD:143201
I-set 283..370 CDD:254352
Ig 300..370 CDD:299845
Ig 388..>457 CDD:299845
I-set 479..561 CDD:254352
Ig 496..561 CDD:143165
FN3 588..681 CDD:238020
FN3 <817..856 CDD:238020
fn3 864..952 CDD:278470
PrtgNP_001032740.2 Ig 32..124 CDD:416386
Ig strand A 32..35 CDD:409353
Ig strand A' 38..44 CDD:409353
Ig strand B 48..58 CDD:409353
Ig strand C 62..68 CDD:409353
Ig strand C' 70..73 CDD:409353
Ig strand D 78..83 CDD:409353
Ig strand E 85..91 CDD:409353
Ig strand F 103..110 CDD:409353
Ig strand G 114..124 CDD:409353
Ig 131..218 CDD:416386
Ig strand B 146..150 CDD:409353
Ig strand C 159..163 CDD:409353
Ig strand E 183..187 CDD:409353
Ig strand F 197..202 CDD:409353
Ig strand G 211..214 CDD:409353
Ig_3 230..302 CDD:404760
Ig strand B 247..251 CDD:409353
Ig strand C 260..264 CDD:409353
Ig strand E 282..286 CDD:409353
Ig strand F 296..301 CDD:409353
I-set 322..407 CDD:400151
Ig strand C 352..357 CDD:409353
Ig strand C' 359..362 CDD:409353
Ig strand D 367..371 CDD:409353
Ig strand E 373..378 CDD:409353
Ig strand F 387..394 CDD:409353
Ig strand G 398..407 CDD:409353
FN3 414..507 CDD:238020
FN3 512..605 CDD:238020
fn3 619..694 CDD:394996
FN3 721..809 CDD:238020
FN3 816..906 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 974..1018
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1078..1193
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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