Sequence 1: | NP_001259868.1 | Gene: | robo2 / 44522 | FlyBaseID: | FBgn0002543 | Length: | 1519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038937330.1 | Gene: | Robo3 / 315564 | RGDID: | 1311018 | Length: | 1451 | Species: | Rattus norvegicus |
Alignment Length: | 1666 | Identity: | 444/1666 - (26%) |
---|---|---|---|
Similarity: | 657/1666 - (39%) | Gaps: | 425/1666 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 LTNESEIQIKIKSKIKNKTASEIKRRHRNNRDFHGERLKIMPVDRSRRAVFPLLLLLAGLNGLTQ 82
Fly 83 VGALKGENPRIIEHPMDTTVPKNDPFTFNCQAEGNPTPTIQWFKDGRELKT---DTGSHRIMLPA 144
Fly 145 GGLFFLKVIHSRR-ESDAGTYWCEAKNEFGVARSRNATLQVAFLRDEFRLEPANTRVAQGEVALM 208
Fly 209 ECGAPRGSPEPQISWRKNGQTLNLVGNKRIR------IVDGGNLAIQEARQSDDGRYQCVVKNVV 267
Fly 268 GTRESATAFLKVHVRPFLIRGPQNQTAVVGSSVVFQCRIGGDPLPDVLWRRTASGGNMPLRRVHV 332
Fly 333 LEDRSLKLDDVTLEDMGEYTCEADNAVGGITATGILTVHAPPKFVIRPKNQLVEIGDEVLFECQA 397
Fly 398 NGHPRPTLYWSVEGNSSLLLPGYRDGRMEVTLTPEGRSV------LSIARFAREDSGKVVTCNAL 456
Fly 457 NAVGSVSSRTVVSV-DTQFELPPPIIEQGPVNQTLPVKSIVVLPCRTLGTPVPQVSW-----YLD 515
Fly 516 GIPIDVQEHERRNLSDAGALTISDLQRHEDEGLYTCVASNRNGKSSWSGYLR-----------LD 569
Fly 570 TPTNPNIKFFRAPELSTYPGPPGKPQMVEKGENSVTLSWTRSNKVGGSSLVGYVIEMFGKNETDG 634
Fly 635 WVAVGTRVQNTTFTQTGLLPGVNYFFLIRAENSHGLSLPSPMSEPITVGTRYFNSGLDLSEARAS 699
Fly 700 LLSGDV--------------VELSNASVVDSTSMKLTWQIIN-GKYVEGFYVYARQLPNPIVNNP 749
Fly 750 APVTSNTNPLLGSTSTSASASASASALISTKPNIAAAGKRDGETNQSGGGAPTPLNTKYRMLTIL 814
Fly 815 NG-GGASSCTITGLVQYTLYEFFIVPFYKSVEGKPSNS-RIARTL-EDVPSEAPYGMEALL--LN 874
Fly 875 SSAVFLKWKAPELKDRHGVLLNYHVIVRGIDTAHNFSRILTNVTIDAASPTLVLANLTEGVMYTV 939
Fly 940 GVAAGNNAGVGPYCVPATLRLD-PITKRLDPFINQRYPINQDHVNDVLTQPWFIILLGAILAVLM 1003
Fly 1004 LSFGAMVFVKRKHMMMKQSALNTMRGNHT-------SDVLKMP-------------SLSARNGNG 1048
Fly 1049 Y-----------------WLDSSTGGMVW-RPS-------PGGDSLEMQKD-------------H 1075
Fly 1076 IADYAPVCGAPG--------SPAG-------GGTSSGGSGGAGSGA-------SGGDD-IHGGHG 1117
Fly 1118 SERNQQRYVGEYSNIPT-DYAEV---------SSFGKAPSEYGRHGN-----ASPAPYATSSILS 1167
Fly 1168 PHQQQQQQQPRYQQRPVP--GYGLQRPMHPHYQQQQHQQQQAQQTHQQHQALQQHQQLPPSNI-- 1228
Fly 1229 YQQMSTTSEIYPTNTGPSRSVYSEQYYYPKDKQRHIHITENKLSNCH--------TYEAAPG--- 1282
Fly 1283 ---AKQSSPISSQFASVRR--QQLPPNCSIGRESARFKVLNTDQGKNQQNLLDLDGSSMCYNGLA 1342
Fly 1343 DSGCGGSPSPMAMLMSHEDEHALYHTADGDLDDMERLYVKVDEQQPPQQQQQLIPLVPQHPAEGH 1407
Fly 1408 LQSWRNQSTRSSRKNGQ--ECIKEPSELIYAPGSVASERSLLSNSGSGTSS-QPAGHNVXPLLPG 1469
Fly 1470 S--------SLGQSQSKSQSQSQSQSDLQSQEQLYAREVRE 1502 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo2 | NP_001259868.1 | Ig1_Robo | 90..185 | CDD:143317 | 45/98 (46%) |
I-set | 91..184 | CDD:254352 | 45/96 (47%) | ||
I-set | 190..279 | CDD:254352 | 37/94 (39%) | ||
Ig2_Robo | 193..279 | CDD:143201 | 35/91 (38%) | ||
I-set | 283..370 | CDD:254352 | 34/86 (40%) | ||
Ig | 300..370 | CDD:299845 | 29/69 (42%) | ||
Ig | 388..>457 | CDD:299845 | 24/74 (32%) | ||
I-set | 479..561 | CDD:254352 | 37/86 (43%) | ||
Ig | 496..561 | CDD:143165 | 26/69 (38%) | ||
FN3 | 588..681 | CDD:238020 | 41/92 (45%) | ||
FN3 | <817..856 | CDD:238020 | 7/39 (18%) | ||
fn3 | 864..952 | CDD:278470 | 24/89 (27%) | ||
Robo3 | XP_038937330.1 | Ig strand A | 182..185 | CDD:409353 | 1/2 (50%) |
Ig strand A' | 187..191 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 195..202 | CDD:409353 | 4/6 (67%) | ||
Ig strand C | 210..215 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 217..220 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 226..230 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 232..238 | CDD:409353 | 2/5 (40%) | ||
Ig strand F | 245..253 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 256..267 | CDD:409353 | 6/10 (60%) | ||
Ig | 274..356 | CDD:416386 | 33/83 (40%) | ||
Ig strand A | 274..277 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 279..283 | CDD:409353 | 2/3 (67%) | ||
Ig strand B | 286..295 | CDD:409353 | 3/8 (38%) | ||
Ig strand C | 301..306 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 309..312 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 315..320 | CDD:409353 | 1/4 (25%) | ||
Ig strand E | 321..328 | CDD:409353 | 3/6 (50%) | ||
Ig strand F | 335..343 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 346..356 | CDD:409353 | 4/9 (44%) | ||
Ig | 361..458 | CDD:416386 | 31/104 (30%) | ||
Ig strand A | 361..365 | CDD:409353 | 2/3 (67%) | ||
Ig strand A' | 367..371 | CDD:409353 | 2/3 (67%) | ||
Ig strand B | 377..385 | CDD:409353 | 3/7 (43%) | ||
Ig strand C | 388..395 | CDD:409353 | 2/6 (33%) | ||
Ig strand C' | 397..400 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 413..418 | CDD:409353 | 1/4 (25%) | ||
Ig strand E | 420..427 | CDD:409353 | 2/6 (33%) | ||
Ig strand F | 433..442 | CDD:409353 | 4/9 (44%) | ||
Ig strand G | 444..455 | CDD:409353 | 2/10 (20%) | ||
Ig | 465..549 | CDD:416386 | 37/90 (41%) | ||
Ig strand A | 465..468 | CDD:409353 | 2/2 (100%) | ||
Ig strand A' | 472..475 | CDD:409353 | 2/2 (100%) | ||
Ig strand B | 481..488 | CDD:409353 | 5/6 (83%) | ||
Ig strand C | 494..499 | CDD:409353 | 2/4 (50%) | ||
Ig strand C' | 501..503 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 510..514 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 517..522 | CDD:409353 | 2/4 (50%) | ||
Ig strand F | 530..538 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 541..549 | CDD:409353 | 2/7 (29%) | ||
FN3 | 569..662 | CDD:238020 | 41/107 (38%) | ||
FN3 | 693..773 | CDD:238020 | 21/143 (15%) | ||
FN3 | 783..876 | CDD:238020 | 25/97 (26%) | ||
Ig | 77..175 | CDD:416386 | 45/97 (46%) | ||
Ig strand A | 77..81 | CDD:409353 | 3/3 (100%) | ||
Ig strand A' | 84..89 | CDD:409353 | 1/4 (25%) | ||
Ig strand B | 93..101 | CDD:409353 | 3/7 (43%) | ||
Ig strand C | 107..112 | CDD:409353 | 2/4 (50%) | ||
Ig strand C' | 115..117 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 128..131 | CDD:409353 | 1/2 (50%) | ||
Ig strand E | 134..140 | CDD:409353 | 4/5 (80%) | ||
Ig strand F | 152..160 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 163..175 | CDD:409353 | 7/11 (64%) | ||
Ig | 182..267 | CDD:416386 | 36/92 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 106 | 1.000 | Domainoid score | I6432 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D173520at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000772 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_101537 | |
Panther | 1 | 1.100 | - | - | O | PTHR12231 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X493 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.920 |