Sequence 1: | NP_001259868.1 | Gene: | robo2 / 44522 | FlyBaseID: | FBgn0002543 | Length: | 1519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_034997.2 | Gene: | Myom1 / 17929 | MGIID: | 1341430 | Length: | 1667 | Species: | Mus musculus |
Alignment Length: | 1060 | Identity: | 226/1060 - (21%) |
---|---|---|---|
Similarity: | 367/1060 - (34%) | Gaps: | 364/1060 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 156 RRESD------AGTYWCEAKNEFGVARSRNATLQVAFLRDEFRLEPANTRVAQG-EVA------- 206
Fly 207 -------------LMECGAPRGSPEPQISWR---KNGQTLNLVGNKRIRIVDGGNLAIQEARQSD 255
Fly 256 DGRYQ-----CVVKNVVGTRESATAFLKVHVRPFLIRGPQNQTAVVGSSVVFQCRIGGDPLPDVL 315
Fly 316 WRRTASGGNMPLRRVHVLEDRSL------KLDDVTLEDMGEYTCEADNAVGGITATGILTVHAPP 374
Fly 375 KFVIRPKNQLVEIGDEVLFECQANGHPRPTLYW-------SVEGNSSLLLPGYRDGRMEVTLTPE 432
Fly 433 GRSVLSIARFAREDSGKVVTCNALNAVGSVSS-RTVVSVDTQFELPPPIIEQGPVNQTLPVKSIV 496
Fly 497 VLP-----------------------------CRTLGTP-----VPQVSWYLDGIPID----VQE 523
Fly 524 HERRNLSDAGALTISDLQRHEDEGLYTCVASNRNGKSSWSGYLRLDTPTNPNIKFFR--APELST 586
Fly 587 YPGPPGKPQMVEKGENSVTLSWTRSNKVGGSSLVGYVIEMFGKNE--TDGWVAVG-TRVQNTTFT 648
Fly 649 QTGLLPGVNYFFLIRAENSHGLSLPSPMSEPITV------------------------------- 682
Fly 683 --------------------------------GTRYF--------------NSGLDLSEARASLL 701
Fly 702 S-------------------------------GDVVELSNA--SVVDS----TSMKLTW-QIING 728
Fly 729 KYVEGFYVYARQLPNPIVNNPAPVTSNTNPLLGSTSTSASASASASALISTKPNIAAAG----KR 789
Fly 790 DGE---------------------------TNQSGG--GAPTPLNTKYRML-----------TIL 814
Fly 815 NGGGASSCTITGLVQYTLYEFFIVPFYKSVEGKPSNSRIARTLED---VPSEAPYGMEALLLNSS 876
Fly 877 AVFLKWKAPEL---KDRHGVLLNYHVIVRGIDTAHNFSRILTNVTIDAASPTLVLANLTEGVMYT 938
Fly 939 VGVAAGNNAGVGPYCVPATL 958 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo2 | NP_001259868.1 | Ig1_Robo | 90..185 | CDD:143317 | 7/34 (21%) |
I-set | 91..184 | CDD:254352 | 7/33 (21%) | ||
I-set | 190..279 | CDD:254352 | 22/117 (19%) | ||
Ig2_Robo | 193..279 | CDD:143201 | 22/114 (19%) | ||
I-set | 283..370 | CDD:254352 | 17/92 (18%) | ||
Ig | 300..370 | CDD:299845 | 13/75 (17%) | ||
Ig | 388..>457 | CDD:299845 | 17/75 (23%) | ||
I-set | 479..561 | CDD:254352 | 30/119 (25%) | ||
Ig | 496..561 | CDD:143165 | 27/102 (26%) | ||
FN3 | 588..681 | CDD:238020 | 34/95 (36%) | ||
FN3 | <817..856 | CDD:238020 | 9/38 (24%) | ||
fn3 | 864..952 | CDD:278470 | 26/90 (29%) | ||
Myom1 | NP_034997.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 192..217 | 8/43 (19%) | |
IG_like | 264..350 | CDD:214653 | 23/96 (24%) | ||
Ig | 397..464 | CDD:386229 | 25/70 (36%) | ||
FN3 | 490..580 | CDD:238020 | 31/92 (34%) | ||
FN3 | 618..711 | CDD:238020 | 7/92 (8%) | ||
FN3 | 719..809 | CDD:238020 | 22/95 (23%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 818..915 | 18/99 (18%) | |||
FN3 | 916..1010 | CDD:238020 | 30/101 (30%) | ||
FN3 | 1021..1110 | CDD:238020 | |||
Ig | 1137..1203 | CDD:386229 | |||
Ig | 1356..1425 | CDD:386229 | |||
Ig | 1554..1645 | CDD:386229 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S8219 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.950 |