Sequence 1: | NP_001259868.1 | Gene: | robo2 / 44522 | FlyBaseID: | FBgn0002543 | Length: | 1519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001107266.1 | Gene: | ceacam1 / 114465 | ZFINID: | ZDB-GENE-010724-14 | Length: | 1025 | Species: | Danio rerio |
Alignment Length: | 797 | Identity: | 180/797 - (22%) |
---|---|---|---|
Similarity: | 260/797 - (32%) | Gaps: | 229/797 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 97 PMDTTVPKNDPFTFNCQAEGNPTPTIQWFKDGRELKTDTGSHRIMLPAGGLFFLKVIHSRRESDA 161
Fly 162 GTYWCEAKNEFGVARSRNATLQVAFLRDEFRLEPANTRVAQGEVAL--------MECGAPRGSPE 218
Fly 219 PQISWRKNGQTLNLVGNKRIRIVDGGNLAIQEARQSDDGRYQCVVKNVVGTRESATAFLKVHVRP 283
Fly 284 F--LIRGPQNQTAVVGSSVVFQCRIGGDPLPDVLW------------------------------ 316
Fly 317 ------------------------------------------RRTASGGNM-------------P 326
Fly 327 LRRVHVLEDRS-LKLDDVTLEDMGEYTCEADNAVGGITATG--ILTVHAPPKFVIRPKNQLVEIG 388
Fly 389 DEVLFECQANGHPRPTLYWSVEGNSSLLLPGYRDGRMEVTLTPEGRSVLSIARFAREDSGKVVTC 453
Fly 454 NALNAV-GSVSSRTVVS---VDTQFELPPPIIEQGPV-NQTLPVKSIVVLPCRTLGTPVPQVSWY 513
Fly 514 LDGIPIDVQEHERRNLS-DAGALTISDLQRHEDEGLYTCVASNRNGKSSWSGYLRLDTPTNPNIK 577
Fly 578 FFRAPELSTYPGPPGKPQMVEKGENSVTLSWTRSNKVG-------GSSLVG----YVIEMFGKNE 631
Fly 632 TDGWVAVGTRVQNTTFTQTGLLPGVNYFFLIRAENSHGLSLPSPMSEPITVGTRYFNSGLDLSEA 696
Fly 697 RASLLSGDVVELSNASVVDSTSMKLTWQIINGKYVEGFYVYARQ--LPNPIVNNPAPVTSNTNPL 759
Fly 760 LGSTSTSASASASASAL 776 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo2 | NP_001259868.1 | Ig1_Robo | 90..185 | CDD:143317 | 21/87 (24%) |
I-set | 91..184 | CDD:254352 | 21/86 (24%) | ||
I-set | 190..279 | CDD:254352 | 23/96 (24%) | ||
Ig2_Robo | 193..279 | CDD:143201 | 22/93 (24%) | ||
I-set | 283..370 | CDD:254352 | 31/176 (18%) | ||
Ig | 300..370 | CDD:299845 | 24/157 (15%) | ||
Ig | 388..>457 | CDD:299845 | 19/68 (28%) | ||
I-set | 479..561 | CDD:254352 | 26/83 (31%) | ||
Ig | 496..561 | CDD:143165 | 21/65 (32%) | ||
FN3 | 588..681 | CDD:238020 | 21/103 (20%) | ||
FN3 | <817..856 | CDD:238020 | |||
fn3 | 864..952 | CDD:278470 | |||
ceacam1 | NP_001107266.1 | Ig | 32..115 | CDD:299845 | |
Ig | 133..208 | CDD:299845 | |||
IG_like | 221..291 | CDD:214653 | 22/90 (24%) | ||
Ig_2 | 221..284 | CDD:290606 | 18/83 (22%) | ||
Ig | 298..387 | CDD:299845 | 22/92 (24%) | ||
Ig_2 | 400..469 | CDD:290606 | 9/68 (13%) | ||
IG | 400..456 | CDD:214652 | 9/55 (16%) | ||
Ig | 480..564 | CDD:299845 | 19/84 (23%) | ||
IG_like | 494..559 | CDD:214653 | 19/65 (29%) | ||
IG_like | 578..648 | CDD:214653 | 26/87 (30%) | ||
Ig_2 | 579..648 | CDD:290606 | 26/86 (30%) | ||
Ig_CEACAM_D4 | 650..741 | CDD:143217 | 30/103 (29%) | ||
IG_like | 653..740 | CDD:214653 | 29/99 (29%) | ||
Ig_2 | 752..825 | CDD:290606 | 20/92 (22%) | ||
IG_like | 755..825 | CDD:214653 | 18/89 (20%) | ||
Ig | 827..917 | CDD:299845 | 21/101 (21%) | ||
IG_like | 836..917 | CDD:214653 | 16/72 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170596146 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.930 |