Sequence 1: | NP_001259868.1 | Gene: | robo2 / 44522 | FlyBaseID: | FBgn0002543 | Length: | 1519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002937567.3 | Gene: | robo3 / 100493553 | XenbaseID: | XB-GENE-1032334 | Length: | 1424 | Species: | Xenopus tropicalis |
Alignment Length: | 1562 | Identity: | 439/1562 - (28%) |
---|---|---|---|
Similarity: | 687/1562 - (43%) | Gaps: | 361/1562 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 91 PRIIEHPMDTTVPKNDPFTFNCQAEGNPTPTIQWFKDGRELKTDTG---SHRIMLPAGGLFFLKV 152
Fly 153 IHSRR-ESDAGTYWCEAKNEFGVARSRNATLQVAFLRDEFRLEPANTRVAQGEVALMECGAPRGS 216
Fly 217 PEPQISWRKNGQTLNLVGNKRIRI-VDGGNLAIQEARQSDDGRYQCVVKNVVGTRESATAFLKVH 280
Fly 281 VRPFLIRGPQNQTAVVGSSVVFQCRIGGDPLPDVLWRRTASGGNMPLRRVHVLEDRSLKLDDVTL 345
Fly 346 EDMGEYTCEADNAVGGITATGILTVHA----PPKFVIRPKNQLVEIGDEVLFECQANGHPRPTLY 406
Fly 407 WSVEGNSSLLLPGYRD---GRMEVTLTPEGRSVLSIARFAREDSGKVVTCNALNAVGSVSSRTVV 468
Fly 469 SV-DTQFELPPPIIEQGPVNQTLPVKSIVVLPCRTLGTPVPQVSWYLDGIPIDVQEHERRNLSDA 532
Fly 533 GALTISDLQRHEDEGLYTCVASNRNGKSSWSGYLRLDTPTNPNIKFFRAPELSTYPGPPGKPQMV 597
Fly 598 EKGENSVTLSWTRSNKVGGSSLVGYVIEMFGKNETDGWVAVGTRVQNTTFTQTGLLPGVNYFFLI 662
Fly 663 RAENSHGLSLPSPMSEPI-TVGTRYFNSGLDLSEARASLLSGD-VVELSNASVVDSTSMKLTWQI 725
Fly 726 -INGKYVEGFYVYARQLPNPIVNNPAPVTSNTNPLLGSTSTSASASASASALISTKPNIAAAGKR 789
Fly 790 DGETNQSGGGAPTPLNTKYRMLTILNGGGASSCTITGLVQYTLYEFFIVPFYKSVEGKPSNSRIA 854
Fly 855 RTLEDVPSEAPYGMEALLL---NSSAVFLKWKAPELKDRHGVLLNYHVIVRGIDTAHNFSRILTN 916
Fly 917 VTIDAASPTLVLANLTEGVMYTVGVAAGNNAGVGPYCVPATLRLDPITKRLDPFINQRYPINQDH 981
Fly 982 VNDVLTQPWFIILLGAILAVLMLSFGAMVFVKRKHMMMKQSALNTMRGNHTSDVLKMPSLSARNG 1046
Fly 1047 NGY------WLDSSTGGMVWRPSPGGDSLEMQKDHIADYAPVC-----GAPGSPAGGGTSSGGSG 1100
Fly 1101 GAGSGASGGDDIHGGHGSERNQQRYVGEYSNIPTDYAEVSSFGKAPSEYGRHGNASP-------- 1157
Fly 1158 --------APYATSSIL--------SPHQQQQQ-------------QQPRYQQRPVPGYGLQR-- 1191
Fly 1192 ----------------PMHPHYQQQQHQQQQA----------------QQTHQQHQALQQHQQLP 1224
Fly 1225 --------PSNIYQQMSTTSEIYPTNTGPSRSVYSEQYYYPKDKQRHIHITENKLSNCHTYEAAP 1281
Fly 1282 GAK------------------QSSP---ISSQFASVRRQ----QLPPNCSIGRESARFKVLNTDQ 1321
Fly 1322 GKNQ--QNLLDLDGSSMCYNGLADSGCGGSPSPMAMLMSHEDEHALYHTADGDLDDMERLYVKVD 1384
Fly 1385 EQQPPQQQQQLIPLVPQHPAEGHLQSWRNQSTRSS-----------RKNG----------QECIK 1428
Fly 1429 EPSELI-YAPGSVASERSLLSNSGSGTSSQPAGHNVXPLLPGSSLGQSQSKSQSQSQSQSDLQSQ 1492
Fly 1493 EQ 1494 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo2 | NP_001259868.1 | Ig1_Robo | 90..185 | CDD:143317 | 51/97 (53%) |
I-set | 91..184 | CDD:254352 | 51/96 (53%) | ||
I-set | 190..279 | CDD:254352 | 42/89 (47%) | ||
Ig2_Robo | 193..279 | CDD:143201 | 40/86 (47%) | ||
I-set | 283..370 | CDD:254352 | 34/86 (40%) | ||
Ig | 300..370 | CDD:299845 | 28/69 (41%) | ||
Ig | 388..>457 | CDD:299845 | 25/71 (35%) | ||
I-set | 479..561 | CDD:254352 | 36/81 (44%) | ||
Ig | 496..561 | CDD:143165 | 25/64 (39%) | ||
FN3 | 588..681 | CDD:238020 | 39/93 (42%) | ||
FN3 | <817..856 | CDD:238020 | 8/38 (21%) | ||
fn3 | 864..952 | CDD:278470 | 26/90 (29%) | ||
robo3 | XP_002937567.3 | IgC_1_Robo | 65..163 | CDD:409490 | 51/97 (53%) |
Ig strand B | 82..86 | CDD:409490 | 1/3 (33%) | ||
Ig strand C | 95..99 | CDD:409490 | 1/3 (33%) | ||
Ig strand E | 122..126 | CDD:409490 | 2/3 (67%) | ||
Ig strand F | 141..146 | CDD:409490 | 2/4 (50%) | ||
Ig strand G | 155..158 | CDD:409490 | 2/2 (100%) | ||
Ig | 170..255 | CDD:416386 | 41/87 (47%) | ||
Ig strand A | 170..173 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 175..179 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 183..190 | CDD:409353 | 4/6 (67%) | ||
Ig strand C | 198..203 | CDD:409353 | 3/4 (75%) | ||
Ig strand C' | 205..208 | CDD:409353 | 0/5 (0%) | ||
Ig strand D | 214..218 | CDD:409353 | 2/3 (67%) | ||
Ig strand E | 220..226 | CDD:409353 | 3/5 (60%) | ||
Ig strand F | 233..241 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 244..255 | CDD:409353 | 5/10 (50%) | ||
Ig | 262..344 | CDD:416386 | 33/83 (40%) | ||
Ig strand A | 262..265 | CDD:409353 | 2/2 (100%) | ||
Ig strand A' | 267..271 | CDD:409353 | 2/3 (67%) | ||
Ig strand B | 274..283 | CDD:409353 | 3/8 (38%) | ||
Ig strand C | 289..294 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 297..300 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 303..308 | CDD:409353 | 1/4 (25%) | ||
Ig strand E | 309..316 | CDD:409353 | 2/6 (33%) | ||
Ig strand F | 323..331 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 334..344 | CDD:409353 | 4/9 (44%) | ||
Ig | 353..449 | CDD:416386 | 33/100 (33%) | ||
Ig strand A | 353..357 | CDD:409353 | 1/3 (33%) | ||
Ig strand A' | 359..363 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 369..377 | CDD:409353 | 3/7 (43%) | ||
Ig strand C | 380..387 | CDD:409353 | 2/6 (33%) | ||
Ig strand C' | 389..392 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 405..410 | CDD:409353 | 2/6 (33%) | ||
Ig strand E | 412..419 | CDD:409353 | 3/8 (38%) | ||
Ig strand F | 425..434 | CDD:409353 | 3/9 (33%) | ||
Ig strand G | 436..447 | CDD:409353 | 2/10 (20%) | ||
Ig | 457..543 | CDD:416386 | 38/87 (44%) | ||
Ig strand A | 457..460 | CDD:409353 | 2/2 (100%) | ||
Ig strand A' | 464..467 | CDD:409353 | 2/2 (100%) | ||
Ig strand B | 473..480 | CDD:409353 | 2/6 (33%) | ||
Ig strand C | 486..491 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 493..495 | CDD:409353 | 1/1 (100%) | ||
Ig strand D | 502..506 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 509..514 | CDD:409353 | 2/4 (50%) | ||
Ig strand F | 522..530 | CDD:409353 | 6/7 (86%) | ||
Ig strand G | 533..543 | CDD:409353 | 4/9 (44%) | ||
FN3 | 561..655 | CDD:238020 | 39/93 (42%) | ||
FN3 | 687..766 | CDD:238020 | 21/142 (15%) | ||
fn3 | 774..861 | CDD:394996 | 26/91 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 103 | 1.000 | Domainoid score | I6691 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D173520at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000772 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | LDO | PTHR12231 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X493 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 5.110 |