Sequence 1: | NP_001259868.1 | Gene: | robo2 / 44522 | FlyBaseID: | FBgn0002543 | Length: | 1519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002937566.3 | Gene: | robo4 / 100493397 | XenbaseID: | XB-GENE-955396 | Length: | 1166 | Species: | Xenopus tropicalis |
Alignment Length: | 1522 | Identity: | 301/1522 - (19%) |
---|---|---|---|
Similarity: | 470/1522 - (30%) | Gaps: | 616/1522 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 91 PRIIEHPMDTTVPKNDPFTFNCQAEGNPTPTIQWFKDGRELKTDTGSHR----IMLPAGGLFFLK 151
Fly 152 VIHSRRESDAGTYWCEAKNEFGVARSRNATLQVAFLRDEFRLEPANTRVAQGEVALMECGAPRGS 216
Fly 217 PEPQISWRKNGQTLNLVGNKRIRIVDGGNLAIQEARQSDDGRYQCVVKNVVGTRESATAFLKVHV 281
Fly 282 RPFLIRGPQNQTAVVGSSVVFQCRIGGDPLPDVLWRRTASGGNMPLRRVHVLEDRSLKLDDVTLE 346
Fly 347 DMGEYTCEADNAVGGITATGILTVHAPPKFVIRPKNQLVEIGDEVLFECQANGHPRPTLYWSVEG 411
Fly 412 NSSLLLPGYRDGRMEVTLTPEGRSVLSIARFAREDSGKVVTCNALNAVGSVSSRTVVSVDTQFEL 476
Fly 477 PPPIIEQGPVNQTLPVKSIVVLPCRTLGTPVPQVSWYLDGIPIDVQEHERRNLSDAGALTISDLQ 541
Fly 542 RHEDEGLYTCVASNRNGKSSWSGYLRLDTPTNPNIKFFRAPELSTYPGPPGKPQMVEKGENSVTL 606
Fly 607 SWTRSNKVGGSSLVGYVIEMFGKNETDGWVAVGTRVQNTTFTQTGLLPGVNYFFLIRAENSHGLS 671
Fly 672 LPSPMSEPITVGTRYFNSGLDLSEARASLLSGDVVELSNASVVDSTSMKLTWQII-NGKYVEGFY 735
Fly 736 VYARQLPNPIVNNPAPVTSNTNPLLGSTSTSASASASASALISTKPNIAAAGKRDGETNQSGGGA 800
Fly 801 PTPLNTKYRMLTILNGGGASSCTITGLVQYTLYEFFIVPFYKSVEGKPSNSRIARTLEDVPSEAP 865
Fly 866 YGMEALLL--NSSAVFLKWKAPELKDRHGVLLNYHVIVRGIDTAHNFSRILTNVTIDAASPTLVL 928
Fly 929 ANLTEGVMYTVGVAAGNNAGVGPYCVPATLRLD-PITKRLDPFINQRYPINQDHVNDVLTQPWFI 992
Fly 993 ILLGAILAVLMLSFGAMVFVKRKHMMMKQSALNTMRGN-------------HTSDVLKMPSL--- 1041
Fly 1042 --SARNGNGYWLDSSTGGM----VWRPSPGGDSLEMQKDHI----------ADYAPVCGAPGSPA 1090
Fly 1091 GGGT----------------SSGGSGGAG---------------------SGASGGDDIHGGHGS 1118
Fly 1119 ERNQQRYVGEYSNIPTDYAEVSSFGKAPSEYGRHGNASPAPYATSSILSPHQQQQQQ---QPRYQ 1180
Fly 1181 QRPVPGYG----------LQRPMHPHYQQQQHQQQQAQQTHQQHQALQQHQQLPPSNIYQQMSTT 1235
Fly 1236 SEIYPTNTGPSRSVYSEQYYYPKDKQRHIHITENKLSNC--HTYEAAPGAKQSSPISSQFASVRR 1298
Fly 1299 QQLPPNCSIGRESARFKVLN-----------------TDQGKNQQNLLDLDGS-------SMCYN 1339
Fly 1340 GLADSGCGGSPSPMAMLMSHEDEHALYHTADGDLDDMERLYVKVDEQQPPQQQQQLIPLVPQHPA 1404
Fly 1405 EGHLQSWRNQSTRSSRKNGQECIKEPSELIYAPGSVASER------SLLSNS-GSGTSSQPAGHN 1462
Fly 1463 VXPLLPGSSLGQSQSKSQSQSQSQSDL 1489 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
robo2 | NP_001259868.1 | Ig1_Robo | 90..185 | CDD:143317 | 45/97 (46%) |
I-set | 91..184 | CDD:254352 | 45/96 (47%) | ||
I-set | 190..279 | CDD:254352 | 36/88 (41%) | ||
Ig2_Robo | 193..279 | CDD:143201 | 34/85 (40%) | ||
I-set | 283..370 | CDD:254352 | 29/86 (34%) | ||
Ig | 300..370 | CDD:299845 | 23/69 (33%) | ||
Ig | 388..>457 | CDD:299845 | 2/68 (3%) | ||
I-set | 479..561 | CDD:254352 | 3/81 (4%) | ||
Ig | 496..561 | CDD:143165 | 3/64 (5%) | ||
FN3 | 588..681 | CDD:238020 | 0/92 (0%) | ||
FN3 | <817..856 | CDD:238020 | 12/38 (32%) | ||
fn3 | 864..952 | CDD:278470 | 20/89 (22%) | ||
robo4 | XP_002937566.3 | Ig | 70..168 | CDD:416386 | 45/97 (46%) |
Ig strand A | 70..74 | CDD:409353 | 3/3 (100%) | ||
Ig strand A' | 77..82 | CDD:409353 | 1/4 (25%) | ||
Ig strand B | 86..94 | CDD:409353 | 3/7 (43%) | ||
Ig strand C | 100..105 | CDD:409353 | 3/4 (75%) | ||
Ig strand C' | 108..110 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 121..125 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 128..134 | CDD:409353 | 4/5 (80%) | ||
Ig strand F | 145..153 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 156..168 | CDD:409353 | 7/11 (64%) | ||
Ig | 175..260 | CDD:416386 | 35/86 (41%) | ||
Ig strand A | 175..178 | CDD:409353 | 2/2 (100%) | ||
Ig strand A' | 180..184 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 188..195 | CDD:409353 | 2/6 (33%) | ||
Ig strand C | 203..208 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 210..213 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 219..222 | CDD:409353 | 1/2 (50%) | ||
Ig strand E | 225..231 | CDD:409353 | 3/5 (60%) | ||
Ig strand F | 238..246 | CDD:409353 | 3/7 (43%) | ||
Ig strand G | 249..260 | CDD:409353 | 5/10 (50%) | ||
Ig | 269..349 | CDD:416386 | 28/81 (35%) | ||
Ig strand A' | 272..276 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 279..288 | CDD:409353 | 4/8 (50%) | ||
Ig strand C | 294..299 | CDD:409353 | 1/4 (25%) | ||
Ig strand C' | 302..305 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 308..313 | CDD:409353 | 1/4 (25%) | ||
Ig strand E | 314..321 | CDD:409353 | 1/6 (17%) | ||
Ig strand F | 328..336 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 339..349 | CDD:409353 | 2/9 (22%) | ||
FN3 | 377..462 | CDD:238020 | 27/145 (19%) | ||
fn3 | 471..557 | CDD:394996 | 20/90 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 82 | 1.000 | Domainoid score | I8278 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.000 |