DRSC/TRiP Functional Genomics Resources

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Protein Alignment robo2 and igsf9b

DIOPT Version :9

Sequence 1:NP_001259868.1 Gene:robo2 / 44522 FlyBaseID:FBgn0002543 Length:1519 Species:Drosophila melanogaster
Sequence 2:XP_031761656.1 Gene:igsf9b / 100379858 XenbaseID:XB-GENE-5887265 Length:1392 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
robo2NP_001259868.1 Ig1_Robo 90..185 CDD:143317
I-set 91..184 CDD:254352
I-set 190..279 CDD:254352
Ig2_Robo 193..279 CDD:143201
I-set 283..370 CDD:254352
Ig 300..370 CDD:299845
Ig 388..>457 CDD:299845
I-set 479..561 CDD:254352
Ig 496..561 CDD:143165
FN3 588..681 CDD:238020
FN3 <817..856 CDD:238020
fn3 864..952 CDD:278470
igsf9bXP_031761656.1 IG 30..115 CDD:214652
I-set 139..225 CDD:400151
Ig strand A 139..142 CDD:409353
Ig strand A' 148..151 CDD:409353
Ig strand B 157..164 CDD:409353
Ig strand C 170..175 CDD:409353
Ig strand D 185..189 CDD:409353
Ig strand E 191..195 CDD:409353
Ig strand F 204..212 CDD:409353
Ig strand G 215..225 CDD:409353
I-set 229..321 CDD:400151
Ig strand B 246..250 CDD:409353
Ig strand C 260..264 CDD:409353
Ig strand E 286..290 CDD:409353
Ig strand F 300..305 CDD:409353
Ig strand G 314..317 CDD:409353
Ig 344..405 CDD:409353
Ig strand C 355..360 CDD:409353
Ig strand E 380..384 CDD:409353
Ig strand F 394..399 CDD:409353
Ig 429..505 CDD:416386
Ig strand A' 429..432 CDD:409353
Ig strand B 438..445 CDD:409353
Ig strand C 451..456 CDD:409353
Ig strand C' 458..460 CDD:409353
Ig strand E 471..476 CDD:409353
Ig strand F 484..492 CDD:409353
Ig strand G 495..505 CDD:409353
FN3 510..605 CDD:238020
FN3 622..703 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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