DRSC/TRiP Functional Genomics Resources

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Protein Alignment PPO3 and Lsp2

DIOPT Version :9

Sequence 1:NP_524760.1 Gene:PPO3 / 44513 FlyBaseID:FBgn0261363 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_001287042.1 Gene:Lsp2 / 45326 FlyBaseID:FBgn0002565 Length:701 Species:Drosophila melanogaster


Alignment Length:637 Identity:165/637 - (25%)
Similarity:280/637 - (43%) Gaps:84/637 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 FSIFLKSHRKMASHLIEIFTKMQTVDELQSVAVYARDRVNPVLFNYALSVALLHRPDTKDLELPA 145
            :|:....|.:....|:.:|...:..:..|.|..:||..||..||.||:::|.|.|.|.:.:.|||
  Fly    97 WSVMYDKHEEYVVGLVRLFYFAKNWETFQHVVYWARQHVNKQLFVYAVTIASLFRDDMQGVVLPA 161

  Fly   146 FAQTFPDRFIDSKML---RSMREESF-VVERSAARLPVVSSVKYT--ASDLDVEHRLWYFREDLG 204
            ..:..|..:.||:.|   ...:...| .|::......||....|:  ...|:.:|.|.|:.||:|
  Fly   162 HYEIHPWSYFDSQALEWAEHYKMHGFHHVKQMDNIYNVVIRTNYSNVHGSLNYDHDLAYYLEDVG 226

  Fly   205 VNLHHWHWHLVYPI--EAPDRSIVDKDRRGELFYYMHQQIIARYNAERLSNHMARVQPFNNLDEP 267
            .|..:::::|.||.  :..:..:::|||||||:.|:|.|::||:..||||:.:..|..| |:..|
  Fly   227 FNAFYYYFNLDYPFWTKGGEEHVLNKDRRGELYLYVHWQLLARWYLERLSHDLGEVPAF-NMYVP 290

  Fly   268 IAEGYFPKMDSLVASRAY--PPRFDNTRLSDVDRPNNQLRVGIDDMKRWRERIYEAIHQGYVLDT 330
            ...||...:      |.|  .|::...........:|...  |:.::.:.:|:.:.||:      
  Fly   291 TESGYASNL------RTYYGVPQWHRENHHSFYHEHNYEH--IEHVEMYTQRVMDWIHK------ 341

  Fly   331 NNEKIVLDDAKGIDILGNIIEASDLTPNSTLYGDFHNMGHILIAYSHDPTNKHLEYAGVMGDAST 395
             |||.   |.:.|::|||||:.:..:.:...||....:...::...|...:....:.|:.....|
  Fly   342 -NEKF---DVETINVLGNIIQGNADSVDKKFYGSLDKLYRFIVNEGHHYGHGDESFPGLFMHYDT 402

  Fly   396 AMRDPIFYKWHAFIDNMFQEHKRLLSPYEKQELSFPDVRVESIQVESQGQVNRLTTFWQESDVDM 460
            :|||||||:.:..|.:.:.........|.|::.:|..|.::::.:...     |||:::..|.|:
  Fly   403 SMRDPIFYEVYKTIVSHYWHLMETYPEYHKKDYAFEGVHIDAVHMPES-----LTTYFEHFDSDI 462

  Fly   461 SRGLDFVP--------------RGH-------VLARFTHLQHHEFSYTIKVENSSEATRYGYVRI 504
            |..::..|              ..|       :.||...|.|..|.:|:.|  :|:..:...|::
  Fly   463 SNAVNVEPAVEGSADPLYTFGRNSHYKGSSYVIKARQQRLNHKPFEFTLDV--TSDKAQDAVVKV 525

  Fly   505 FLAPKLDDRNAPMLLEQQRLMMVELDKFVVTMPPGSHTITRNSTESSVTIPFERTF--------- 560
            |:.||.|:....:.||.......||:.|.|.:..|.:.|.|.|.:.|..:....|:         
  Fly   526 FIGPKYDEHGHEIPLEHNYQNFFELEHFKVHLEAGVNHIKRASGDFSFWVNDRTTYLELYQKLMD 590

  Fly   561 -RNLDKLEELQNFLCGCGWPQHMLIPKGRPEGLRFELFVMVSNYEEDKVDQ-----TVADCGCSI 619
             .|.|...:|......||.|..|::|:|:..|..|:.|.||..|.:.:|.|     .|..||...
  Fly   591 ATNSDYKFKLDQSEAHCGVPNRMMLPRGKKGGQVFQFFYMVYPYHQPEVAQFTGYDPVVSCGVGH 655

  Fly   620 AASYCGLRDRLYPDRKSMGFPFDRKPRRGSEILENFLTPNMCAVEVIITHED 671
            .:.|.        |....||||:|..:..    ..|...|...|:|.|.|.|
  Fly   656 GSRYV--------DALPFGFPFNRPVKHD----YYFDVHNFKFVDVKIFHRD 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PPO3NP_524760.1 Hemocyanin_N 19..140 CDD:281684 18/58 (31%)
Hemocyanin_M 150..413 CDD:278784 73/272 (27%)
Hemocyanin_C 422..669 CDD:281685 69/282 (24%)
Lsp2NP_001287042.1 Hemocyanin_N 33..156 CDD:281684 18/58 (31%)
Hemocyanin_M 163..420 CDD:278784 73/275 (27%)
Hemocyanin_C 430..693 CDD:281685 69/281 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470653
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11511
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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