DRSC/TRiP Functional Genomics Resources

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Protein Alignment PPO3 and Lsp2

DIOPT Version :10

Sequence 1:NP_524760.1 Gene:PPO3 / 44513 FlyBaseID:FBgn0261363 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_524816.1 Gene:Lsp2 / 45326 FlyBaseID:FBgn0002565 Length:701 Species:Drosophila melanogaster


Alignment Length:637 Identity:165/637 - (25%)
Similarity:280/637 - (43%) Gaps:84/637 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 FSIFLKSHRKMASHLIEIFTKMQTVDELQSVAVYARDRVNPVLFNYALSVALLHRPDTKDLELPA 145
            :|:....|.:....|:.:|...:..:..|.|..:||..||..||.||:::|.|.|.|.:.:.|||
  Fly    97 WSVMYDKHEEYVVGLVRLFYFAKNWETFQHVVYWARQHVNKQLFVYAVTIASLFRDDMQGVVLPA 161

  Fly   146 FAQTFPDRFIDSKML---RSMREESF-VVERSAARLPVVSSVKYT--ASDLDVEHRLWYFREDLG 204
            ..:..|..:.||:.|   ...:...| .|::......||....|:  ...|:.:|.|.|:.||:|
  Fly   162 HYEIHPWSYFDSQALEWAEHYKMHGFHHVKQMDNIYNVVIRTNYSNVHGSLNYDHDLAYYLEDVG 226

  Fly   205 VNLHHWHWHLVYPI--EAPDRSIVDKDRRGELFYYMHQQIIARYNAERLSNHMARVQPFNNLDEP 267
            .|..:::::|.||.  :..:..:::|||||||:.|:|.|::||:..||||:.:..|..| |:..|
  Fly   227 FNAFYYYFNLDYPFWTKGGEEHVLNKDRRGELYLYVHWQLLARWYLERLSHDLGEVPAF-NMYVP 290

  Fly   268 IAEGYFPKMDSLVASRAY--PPRFDNTRLSDVDRPNNQLRVGIDDMKRWRERIYEAIHQGYVLDT 330
            ...||...:      |.|  .|::...........:|...  |:.::.:.:|:.:.||:      
  Fly   291 TESGYASNL------RTYYGVPQWHRENHHSFYHEHNYEH--IEHVEMYTQRVMDWIHK------ 341

  Fly   331 NNEKIVLDDAKGIDILGNIIEASDLTPNSTLYGDFHNMGHILIAYSHDPTNKHLEYAGVMGDAST 395
             |||.   |.:.|::|||||:.:..:.:...||....:...::...|...:....:.|:.....|
  Fly   342 -NEKF---DVETINVLGNIIQGNADSVDKKFYGSLDKLYRFIVNEGHHYGHGDESFPGLFMHYDT 402

  Fly   396 AMRDPIFYKWHAFIDNMFQEHKRLLSPYEKQELSFPDVRVESIQVESQGQVNRLTTFWQESDVDM 460
            :|||||||:.:..|.:.:.........|.|::.:|..|.::::.:...     |||:::..|.|:
  Fly   403 SMRDPIFYEVYKTIVSHYWHLMETYPEYHKKDYAFEGVHIDAVHMPES-----LTTYFEHFDSDI 462

  Fly   461 SRGLDFVP--------------RGH-------VLARFTHLQHHEFSYTIKVENSSEATRYGYVRI 504
            |..::..|              ..|       :.||...|.|..|.:|:.|  :|:..:...|::
  Fly   463 SNAVNVEPAVEGSADPLYTFGRNSHYKGSSYVIKARQQRLNHKPFEFTLDV--TSDKAQDAVVKV 525

  Fly   505 FLAPKLDDRNAPMLLEQQRLMMVELDKFVVTMPPGSHTITRNSTESSVTIPFERTF--------- 560
            |:.||.|:....:.||.......||:.|.|.:..|.:.|.|.|.:.|..:....|:         
  Fly   526 FIGPKYDEHGHEIPLEHNYQNFFELEHFKVHLEAGVNHIKRASGDFSFWVNDRTTYLELYQKLMD 590

  Fly   561 -RNLDKLEELQNFLCGCGWPQHMLIPKGRPEGLRFELFVMVSNYEEDKVDQ-----TVADCGCSI 619
             .|.|...:|......||.|..|::|:|:..|..|:.|.||..|.:.:|.|     .|..||...
  Fly   591 ATNSDYKFKLDQSEAHCGVPNRMMLPRGKKGGQVFQFFYMVYPYHQPEVAQFTGYDPVVSCGVGH 655

  Fly   620 AASYCGLRDRLYPDRKSMGFPFDRKPRRGSEILENFLTPNMCAVEVIITHED 671
            .:.|.        |....||||:|..:..    ..|...|...|:|.|.|.|
  Fly   656 GSRYV--------DALPFGFPFNRPVKHD----YYFDVHNFKFVDVKIFHRD 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PPO3NP_524760.1 Hemocyanin_N 19..140 CDD:461025 18/58 (31%)
Hemocyanin_M 150..413 CDD:459787 73/272 (27%)
Hemocyanin_C 422..667 CDD:461026 68/280 (24%)
Lsp2NP_524816.1 Hemocyanin_N 33..156 CDD:461025 18/58 (31%)
Hemocyanin_M 161..420 CDD:459787 74/277 (27%)
Hemocyanin_C 429..692 CDD:461026 68/281 (24%)

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