DRSC/TRiP Functional Genomics Resources

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Protein Alignment PPO3 and Lsp1gamma

DIOPT Version :10

Sequence 1:NP_524760.1 Gene:PPO3 / 44513 FlyBaseID:FBgn0261363 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_523868.1 Gene:Lsp1gamma / 38015 FlyBaseID:FBgn0002564 Length:772 Species:Drosophila melanogaster


Alignment Length:719 Identity:172/719 - (23%)
Similarity:295/719 - (41%) Gaps:154/719 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 SMRLG----RSEQFSIFLKSHRKMASHLIEIFTKMQTVDELQSVAVYARDRVNPVLFNYALSVAL 132
            |.:||    :.|.|...:|:|.|.|..|...|...:..:.......:||..||..:|.|||::|:
  Fly    81 SYKLGALLPKGEFFGALVKTHHKQAYGLFNFFYYAKDWETFVRNVAWARIHVNEGMFVYALTLAV 145

  Fly   133 LHRPDTKDLELPAFAQTFPDRFIDSKM-------------------------------------- 159
            :|:|:.:.|.||...:.||..|.:||.                                      
  Fly   146 IHKPEFEG
LILPQIYEIFPQYFFNSKFVYAAEKFDYEVFSKLTMYEKEYKDILYKDYSEFTGNFY 210

  Fly   160 -------------LRSMREESFVVERSAAR------------LPVVSSVK-------YTASDLDV 192
                         :..:.:|.:|.::...|            :.||..:|       || .|:|.
  Fly   211 FYTKDWKTWQWYKMMGLDQEWYVEDKYFLRENLSQFVNDPKYVDVVKGLKKFYMPVDYT-RDIDF 274

  Fly   193 ---EHRLWYFREDLGVNLHHWHWHLVYPIEAPDRSI-VDKDRRGELFYYMHQQIIARYNAERLSN 253
               |.::.||.||||.|.:.::.::.|......:.. :|||||||.:.|..|||:|||..|||:|
  Fly   275 FNDETKMTYFTEDLGWNAYWYYLNMDYAFFLNGKQFGLDKDRRGEYWIYNVQQILARYYQERLAN 339

  Fly   254 HMARVQPFNNLDEPIAEGYFPKMDSLVASRAYPPR---FDNTRLSDVDRPNNQLRVGIDDMKRWR 315
            ....:..|....: |..||.|:: .......|..|   :|.......:.        ...::.:.
  Fly   340 GFGEIPEFFWYKQ-IEYGYDPQL-IYYNGIGYSYRKNYYDFYTYGKFEM--------YSQIQNFF 394

  Fly   316 ERIYEAIHQGYVLDTNNEKIVLDDAKGIDILGNIIEASDLTPNSTLYGDFHNMGHILIAYSHDPT 380
            .|:|:.:..|:....:.:...|...:.|.|:||.::.:..|.:...:..::.:.|:   |..|..
  Fly   395 SRVYKVLETGFYKTADGQVFDLHKPEAIKIVGNYLQGNADTFDKYFFNYYYLLAHM---YFADVD 456

  Fly   381 NKHLE-YAGVMGDASTAMRDPIFYKWHAFIDNMFQEHKRLLSPYEKQELSFPDVRVESIQVESQG 444
            ...:| :..|..:..|.:|||.||.::....::|...|..|.||.:::|.:..:.::.:      
  Fly   457 YNDMEVFPNVFLNFETMLRDPFFYTFYKKFTDVF
YTFKYYLKPYTQKDLFYEGITIKDV------ 515

  Fly   445 QVNRLTTFWQESDVDMSRGLD----FVPRGHV-----LARFTHLQHHEFSYTIKVENSSEATRYG 500
            .|::|.|::...|.|::..|:    ||...::     |||...|.|..|::...::  |:..:.|
  Fly   516 SVSKLVTYYDIVDFDVTNLLNDKMTFVDGQYIWDKALLARQARLNHKPFNFEFTID--SDKVQKG 578

  Fly   501 YVRIFLAPKLDDRNAPMLLEQQRLMMVELDKFVVTMPPGSHTITRNSTESSVTIPFERTFRNLDK 565
            .||:||.||.|:....:.|:..|...|::|.||.....|::||.|:|.|.|.|.....|:..|.|
  Fly   579 VVRVFLGPKFDEYGRVIPLDYNRKNFVQIDSFVYPFIAGTNTIKRSSKEFSWTAEDRITYTELYK 643

  Fly   566 ---------------LEELQNFLCGCGWPQHMLIPKGRPEGLRFELFVMVSNYEE-----DKVDQ 610
                           :.|..|     .:|..:::|||..:|:..:.:..||.:.|     ...|.
  Fly   644 YVMLASEGKYDFPLDISEPHN-----AFPDRLVLPKGWEQGMPMQFYFFVSPFAETYEQFSNFDY 703

  Fly   611 TVADCGCSIAASYCGLRDRLYPDRKSMGFPFDRKPRRGSEILE-NFLTPNMCAVEVIITHEDRTE 674
            |.        :|..|...| :.|.|..|:||||      :|.| :|..||....:|.:.:.|...
  Fly   704 TY--------SSGVGSGTR-FVDTKPFGYPFDR------QIDESDFFVPNGFFKDVKVYYVDTFA 753

  Fly   675 KLRE 678
            |..|
  Fly   754 KYFE 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PPO3NP_524760.1 Hemocyanin_N 19..140 CDD:461025 22/71 (31%)
Hemocyanin_M 150..413 CDD:459787 70/340 (21%)
Hemocyanin_C 422..667 CDD:461026 71/274 (26%)
Lsp1gammaNP_523868.1 Hemocyanin_N 31..153 CDD:461025 22/71 (31%)
Hemocyanin_M 159..490 CDD:459787 70/344 (20%)
Hemocyanin_C 499..747 CDD:461026 71/275 (26%)

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