DRSC/TRiP Functional Genomics Resources

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Protein Alignment PPO3 and Lsp1beta

DIOPT Version :10

Sequence 1:NP_524760.1 Gene:PPO3 / 44513 FlyBaseID:FBgn0261363 Length:683 Species:Drosophila melanogaster
Sequence 2:NP_476624.1 Gene:Lsp1beta / 33274 FlyBaseID:FBgn0002563 Length:789 Species:Drosophila melanogaster


Alignment Length:795 Identity:193/795 - (24%)
Similarity:309/795 - (38%) Gaps:182/795 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADKKNLL---LLFD---HPTEP-VFMDKGGNGTVFDVPDSYVTDRYNQMCKKVQRRVSSASEKN 58
            :|||..|:   .||:   ...:| :|.|....|..|...:||.| .|:...||......:.:   
  Fly    27 IADKAFLMKQKFLFEIVYRVEDPLMFEDHIKQGEKFYFEESYYT-HYDMYMKKFFEAYKAHA--- 87

  Fly    59 VQVKEIAIPDLSCSMRLGRSEQFSIFLKSHRKMASHLIEIFTKMQTVDELQSVAVYARDRVNPVL 123
                           .|.:.|.|...:.||.|.|..|...|...:..:...:...:||..||..:
  Fly    88 ---------------LLPKGEFFGALVMSHAKQARGLFNFFYYAKDWETFAANVAWARMHVNEGM 137

  Fly   124 FNYALSVALLHRPDTKDLELPAFAQTFPDRFIDSK------------------------------ 158
            |.|||::|::||.|...|.||:..:.||..|.:||                              
  Fly   138 FVYALTMAVIHRNDFHGLMLPSIYEIFPQFFFNSKFVFEAEKFDYEMWMKMTMYEKEYMDVYYKT 202

  Fly   159 -------MLRS-------------------------------MREESFVVERSAARLPVVSSVK- 184
                   |.||                               :||..:...:....|.::..|| 
  Fly   203 NGYDYSTMYRSSDYTYMKDFKTWQWWKLMGLGEHWYTEDKFILRENIYEFNQETKWLSMMKDVKK 267

  Fly   185 ------YTASDLDV---EHRLWYFREDLGVNLHHWHWHLVYPIEAPDRSI-VDKDRRGELFYYMH 239
                  || .||::   |.:|.||.||||.|.:.::.::.|.......:. :..|||||.:.|..
  Fly   268 FYMPVDYT-RDLNLYNKESKLSYFTEDLGWNAYWYYLNMDYSFFLDGNTFDLKNDRRGEWWLYNV 331

  Fly   240 QQIIARYNAERLSNHMARVQPFNNLDEPIAEGYFPKMDSLVASRAYPPRFDNTRLSDVDRPNNQL 304
            .|:::||..||||:....:..|:...: |..||.|:   |:........|...........|..:
  Fly   332 HQLLSRYYMERLSHGFGEIPEFSWYQQ-IEMGYDPQ---LIYYNGIGYSFRKNYYEMETYANYDM 392

  Fly   305 RVGIDDMKRWRERIYEAIHQGYVLDTNNEKIVLDDAKGIDILGNIIEASDLTPNSTLYGDFHNMG 369
               :|.:..:.:||:..:..||....:...|.|...:.|:.:||:::.:....:...|..::.:.
  Fly   393 ---LDKITGFLKRIHNIVEMGYYKTADGHTIDLRKPEAIEFIGNMLQGNVDAMDKMFYQFWYMLA 454

  Fly   370 HILIA----YSHDPTNKHLEYAGVMGDASTAMRDPIFYKWHAFIDNMFQEHKRLLSPYEKQELSF 430
            |:..|    |..|      .|..||.:..|.||||::|.::..|..::.:....|..|.|::|..
  Fly   455 HMYFADADYYQMD------VYPNVMLNFETMMRDPMYYMFYKSIAQVYFQFMHYLPKYTKEQLLM 513

  Fly   431 PDVRVESIQVESQGQVNRLTTFWQESDVDMSRGLD---------FVPRGHVLARFTHLQHHEFSY 486
            |.|.:::::|..      |||::...|.|::..|:         ||....:.||...|.|..|:|
  Fly   514 PGVTMKNVEVSD------LTTYFDLVDFDVTNMLNDKMIFQDGKFVWDMSLFARQMRLNHKPFTY 572

  Fly   487 TIKVENSSEATRYGYVRIFLAPKLDDRNAPMLLEQQRLMMVELDKFVVTMPPGSHTITRNSTESS 551
            |..:|  ||......:|.||.||.|:....:.|.:.|:..:|:|:|...:..|::.|||.|:|..
  Fly   573 TYTIE--SEKVEKVVIRAFLGPKFDEFGKVISLAENRMNFMEIDEFYYELKAGTNKITRKSSEFY 635

  Fly   552 VTIPFERTFRN----------------LDKLEELQNFLCGCGWPQHMLIPKGRPEGLRFELFVMV 600
            .|:....|:..                ||..|.      .||:|..:::|.|..:|:..::|.||
  Fly   636 WTVKDRTTYTELYYYTMMAFDGKYDFPLDISEP------HCGFPDRLVLPMGWQKGMPMQMFFMV 694

  Fly   601 SNY-----EEDKVDQTVADCGCSIAASYCGLRDRLYPDRKSMGFPFDRKPRRGSEILE-NFLTPN 659
            ..|     |:.........||....|.|.        |....|:||||      .|.| .|..||
  Fly   695 VPYVAPAHEQFSTFDYTYSCGIGSGARYV--------DSLPFGYPFDR------AIDEYEFFVPN 745

  Fly   660 MCAVEVIITHEDRTE 674
            |...:|.|.|.|..|
  Fly   746 MYFKDVSIYHADTME 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PPO3NP_524760.1 Hemocyanin_N 19..140 CDD:461025 31/120 (26%)
Hemocyanin_M 150..413 CDD:459787 73/345 (21%)
Hemocyanin_C 422..667 CDD:461026 74/275 (27%)
Lsp1betaNP_476624.1 Hemocyanin_N 32..154 CDD:461025 35/140 (25%)
Hemocyanin_M 160..496 CDD:459787 73/349 (21%)
Hemocyanin_C 505..754 CDD:461026 74/276 (27%)

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