DRSC/TRiP Functional Genomics Resources

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Protein Alignment cv and twsg1

DIOPT Version :10

Sequence 1:NP_536786.1 Gene:cv / 44510 FlyBaseID:FBgn0000394 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_001006748.1 Gene:twsg1 / 448420 XenbaseID:XB-GENE-483445 Length:218 Species:Xenopus tropicalis


Alignment Length:230 Identity:86/230 - (37%)
Similarity:123/230 - (53%) Gaps:35/230 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LTVGTIVLLAIVCFYGTVESCNEVVCASIVSKCMLTQSCKCELK--NCSCCKECLKCLGKNYEEC 69
            |.:....||....:...|..||:.:|||.||||:|.:.|.|...  ||||||||:.|||..::||
 Frog     6 LPIPAAALLLCSLWILPVRCCNKALCASDVSKCLLQELCHCRPMDGNCSCCKECMLCLGTLWDEC 70

  Fly    70 CSCVELCPKPNDTRNSLSKKSHVED-FDGVPELFNAVATPDEGDSFGYNWNVFTFQVDFDKYLKG 133
            |.||.:|...|.:....:.||.||: :..:|.||.|:...|.    ..|||:.||          
 Frog    71 CDCVNMCNPRNYSDTPPTSKSTVEEIYQSIPSLFRALTEEDT----QLNWNIVTF---------- 121

  Fly   134 PKLEKDGHY-----FLRTNDKNLDEAIQERDNIVTVN--------CTVIYLDQCVSWNKCRTSCQ 185
            |.:|:..|:     ||.|.::.     ||::..|.|:        |||:|.::|:|.::|:.||:
 Frog   122 PVVEELSHHENLVSFLETVNQP-----QEQNVSVEVSHSNDKEHMCTVVYFNECMSIHQCKVSCE 181

  Fly   186 TTGASSTRWFHDGCCECVGSTCINYGVNESRCRKC 220
            :.|||..||||:.||||||..||:||....:|..|
 Frog   182 SMGASKYRWFHNACCECVGPDCIDYGSKTVKCVNC 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cvNP_536786.1 Tsg 85..221 CDD:461385 52/150 (35%)
twsg1NP_001006748.1 Tsg 86..217 CDD:461385 52/150 (35%)

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