DRSC/TRiP Functional Genomics Resources

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Protein Alignment br and rib

DIOPT Version :9

Sequence 1:NP_001162638.2 Gene:br / 44505 FlyBaseID:FBgn0283451 Length:1011 Species:Drosophila melanogaster
Sequence 2:NP_001261085.1 Gene:rib / 44855 FlyBaseID:FBgn0003254 Length:680 Species:Drosophila melanogaster


Alignment Length:670 Identity:163/670 - (24%)
Similarity:249/670 - (37%) Gaps:162/670 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QHFCLRWNNYQSSITSAFENLRDDEAFVDVTLACEGRSIKAHRVVLSACSPYFRELLKSTPCKHP 69
            |.:||||||:|:::......|.:..::||.:|..:....:||||||:|.||||:.:||..|..|.
  Fly    16 QTYCLRWNNHQTNLVQILHALHEVGSYVDCSLVVDDEQFQAHRVVLAANSPYFQHILKDVPQDHC 80

  Fly    70 VILLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQQQAEDTHSHLAQIQNLA 134
            .|:|..|...::.||::::|.||..|.:......|:||:.|:|.||.....:..|:.:....: :
  Fly    81 SIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHASVTPTSS-S 144

  Fly   135 NSGGRTPLNTHTQSLPHPHHGSLHDDGGSSTLFSRQGAGS-----PPPTAVPSLPSHINNQLLKR 194
            .:||..|.|....:    |..|:.   .:||..|...|.|     |||......|.:.:....:.
  Fly   145 GAGGAKPQNGSASN----HSSSVI---STSTHISPSAAISSSCSPPPPPQFGYQPGYSHYPQQQP 202

  Fly   195 MAMMHRSSAAAAAEETSHAFKRLRGSDNSLPLSGAVGSGSNNNSPDLPPLHARSA--SPQQTPAD 257
            |:.....:..|....|           .:.|.|.|.|:|.......|.|..|.:.  |..::.||
  Fly   203 MSASQIPAGEAPLTPT-----------QATPHSAASGAGEAGGQWPLTPSAAAAMLNSVYESAAD 256

  Fly   258 FSTIKHHNNNNTPPLKEEKRNGPTGNGNSGNGNGNGNGASNGNGISISDKLGSLTP---SPLARA 319
            .:           |||.:|.:..:....|||.:                     ||   :.||:|
  Fly   257 MN-----------PLKRKKLSAISSMLLSGNRD---------------------TPILRNVLAQA 289

  Fly   320 GADDVKSEPMDMVCSNNNANANDE------HSND--------STGE--HDANRSSSGDGGKGSLS 368
            ...| .|:|..|       |||.|      |.|.        |.||  |..|.|..| |.|..||
  Fly   290 NPAD-SSQPGPM-------NANGEKTPTHPHQNTQLPAGLGVSGGERNHSFNGSDYG-GDKEPLS 345

  Fly   369 SGND----EEIGDGLASHHAAPQF--------------IMSPAENKMFHAAA--FNFPN---IDP 410
            ...|    ||.|.   |....|::              |.:..|......|:  :..|:   .|.
  Fly   346 PYTDRSFEEETGQ---SGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDK 407

  Fly   411 SALLGLNTQLQQSGDLAVSPQGGSTGSLLSGVIVPGGSGGTPSNSSSNNNNNNSNNQQQKVEQQS 475
            ...|.:.|..........||.|..:.   .|......:.....|....:.:::...:.|||:...
  Fly   408 VRKLNITTGRGTHRTPKRSPPGAESS---QGFSYSAAAAAAAHNYGHGHGHHSEVKRDQKVDHVP 469

  Fly   476 SPHQLLQQQHHSTPHTNSPQ---------LKQEQPKSGGGSCKSSDLH---IAAGSERSLSRSSQ 528
            :        ||..|.|..|.         |:|.....||.......||   :||.:..:.:|.|.
  Fly   470 A--------HHGMPPTIPPSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRLSS 526

  Fly   529 GMPD----AGGHS-ATPSPTAAYHKRERER-------------ERERERERERERERSLDHER-- 573
            ...:    :.||. .:|||...::..|:|.             :|||:::...:.:...|||:  
  Fly   527 SPAEMDQRSNGHGMRSPSPQGRHYPHEQEAMDLEMEKHEQNIIKRERDQDEREDADDEEDHEQEH 591

  Fly   574 --DL-----ERPGGTGSPPP 586
              ||     |||....||.|
  Fly   592 VEDLSLARKERPPSPYSPQP 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brNP_001162638.2 BTB 22..118 CDD:279045 35/95 (37%)
BTB 33..118 CDD:197585 33/84 (39%)
C2H2 Zn finger 712..729 CDD:275368
C2H2 Zn finger 742..763 CDD:275368
ribNP_001261085.1 BTB 33..133 CDD:279045 35/99 (35%)
BTB 44..133 CDD:197585 33/88 (38%)
HTH_psq 373..417 CDD:283007 7/43 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.020

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