DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment br and lola

DIOPT Version :9

Sequence 1:NP_001162638.2 Gene:br / 44505 FlyBaseID:FBgn0283451 Length:1011 Species:Drosophila melanogaster
Sequence 2:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster


Alignment Length:1134 Identity:237/1134 - (20%)
Similarity:353/1134 - (31%) Gaps:432/1134 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDDTQHFCLRWNNYQSSITSAFENLRDDEAFVDVTLACEGRSIKAHRVVLSACSPYFRELLKSTP 65
            |||.|.|||||||:||::.|.|:.|.::|..||.|||.||:.:|||:||||||||||..||:...
  Fly     1 MDDDQQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQY 65

  Fly    66 CKHPVILLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQQQAEDTHSHLAQI 130
            .|||:.:|:||.:.:|.|:::::|.||||:.|..|.:.||.||.|::.||:.             
  Fly    66 DKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSD------------- 117

  Fly   131 QNLANSGGRTPLNTHTQSLPHPHHGSLHDDGGSSTLFSRQGAGSPPPTAVPSLPSHINNQLLKRM 195
                                                 :|.|.|..|.   |....|         
  Fly   118 -------------------------------------NRTGGGVAPK---PESSGH--------- 133

  Fly   196 AMMHRS---SAAAAAEETSHAFKRLRGSDNSLPLSGAV-GSGSNNNSPDLPPLHARSASPQQTPA 256
               ||.   |.|...|:|..|  || .:..::..||.| ||...::||.......|..|.:... 
  Fly   134 ---HRGGKLSGAYTLEQTKRA--RL-ATGGAMDTSGDVSGSREGSSSPSRRRRKVRRRSMENDA- 191

  Fly   257 DFSTIKHHNNNNTPPLKEEKRN----GPTGNG-----------NSGNGNGNGNGAS--------- 297
                   |:|:|:..|:....|    ..||.|           :||...|..:.||         
  Fly   192 -------HDNSNSSVLQAAASNQSILQQTGAGLAVSALVTTQLSSGPAAGTSSQASSTQQQQPLT 249

  Fly   298 --NGNGISISDKLGSLTPSPLARAGADDVKSEPMDMVCSNNNANANDEH---SNDSTGEHDANRS 357
              |....:.|.||.|.|.:|.:.|.|.          .:...|:.:.:.   ::|:....:....
  Fly   250 STNVTKKTESAKLTSSTAAPASGASAS----------AAVQQAHLHQQQAQTTSDAINTENVQAQ 304

  Fly   358 SSGDGGKGSLSSGNDEEIGDGLASHHAAPQFIMSPAENKMFHAAAFNFPNIDPSALLGLNTQLQQ 422
            |.| |.:|  ..|:||:|.:|.|..                          .|::..|.|     
  Fly   305 SQG-GAQG--VQGDDEDIDEGSAVG--------------------------GPNSATGPN----- 335

  Fly   423 SGDLAVSPQGGSTGSLLSGVIVPGGSGGTPSNSSSNNNNNNSNNQ----------QQKVEQQSSP 477
                   |...|..::.:||:|. ........||||:.:...:|.          :.|.|.....
  Fly   336 -------PASASASAVHAGVVVK-QLASVVDKSSSNHKHKIKDNSVSSVGSEMVIEPKAEYDDDA 392

  Fly   478 H-----QLLQQQHHSTPHTNSPQLKQEQPKSGGGSCKSSDLHIAAGSERSLSRSSQGMPDAGGHS 537
            |     .|...:...|    ..:|.|....|.||...|...   |..:...|:...|:.......
  Fly   393 HDENVEDLTLDEEDMT----MEELDQTAGTSQGGEGSSQTY---ATWQHDRSQDELGLMAQDAQQ 450

  Fly   538 ATPSPTAAYHKRERERERERERERERERERSLDHERD------------------------LER- 577
            ..|..:    |:::..:.|..:: |.|.:..|....|                        ||. 
  Fly   451 RDPQAS----KQDKGEQTEGAQD-EFELDDCLLESNDIVITQNKDGFVLHVKKLGNITAAKLEEN 510

  Fly   578 --------------PGGTGSPPP-------PPPSHHSHFGQHPLSLLPSHHQLHATHHEL----- 616
                          .|..|.|.|       ...:.||.......:|..:..:|.::..||     
  Fly   511 QAVAQQQGQAAVTVTGPAGQPTPTITELLNAAAASHSEPKPTLTTLTSTPIKLPSSECELINIKK 575

  Fly   617 -----SAAAAHHAHAHAHAAHAHALARAGSPMEHHHLLHHRRASLSPSGAVSSASGAGGRGGGAG 676
                 :..|.||.|..:...|.|.:.:..| .|.||..||::.                      
  Fly   576 IIPATTTIATHHPHTSSTIIHPHHIIQHVS-QEPHHQEHHQQH---------------------- 617

  Fly   677 GPGGPGGSLLSSVRAQDVAQANRLLLPLPLNACHRCDVCGKLLSTKLTLKRHKEQQHLQPLNNAV 741
                      .::..::|.|                           |.::|.:|||        
  Fly   618 ----------QTIHIEEVPQ---------------------------TSQQHHQQQH-------- 637

  Fly   742 CNLCHKVFRTLNSLNNHKSIYHRRQKNHHSYFHHGAGVSQAGSPGSRLHQSLSSLSAAAAAANNS 806
                                       ||..        |...|   .|..:.|:  ..|....:
  Fly   638 ---------------------------HHQL--------QTVQP---THTQVQSI--ITAHPGQT 662

  Fly   807 VNVGGGSVGGAGGNAVAAAAAAAAAAAELLLSPIVGAAAVAGGTASSTLQLAAAH---QQQQQQS 868
            :|:.|..      |...|.:...|:........|:|...       ..||:...|   |.|..:.
  Fly   663 INLVGLR------NVQLADSKPIASRIRYSRGKIIGPTV-------QNLQIVETHEPIQHQHHEL 714

  Fly   869 SPGIVKPCMDFLXDQQQLLQQLFHVALNNSAAAAAAAAAAAAAGG------SGGGPGGVGAGPES 927
            |.|              ...::..:.|||..|:||..:.......      ..|...|:|..|..
  Fly   715 SDG--------------TKYEISEIDLNNPNASAAIISDLVKYAEIDDIELPDGTKIGIGFAPSE 765

  Fly   928 INGGGQEYGGVQGPSGTPTVDLTQLEHAAGGGGFSAAAALQHHLPHHL--AHQHPMS----HQHP 986
            |.                       ||....||.:....::|. |..|  .|||..:    |.|.
  Fly   766 IT-----------------------EHMQTSGGETHITTIEHE-PQELQTVHQHEQTQQTHHIHA 806

  Fly   987 HQL-TH-------------QHPHPHPHQH 1001
            .|| ||             ||.....|||
  Fly   807 GQLQTHHIQTVVQSSSGQQQHDQQQHHQH 835

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brNP_001162638.2 BTB 22..118 CDD:279045 47/95 (49%)
BTB 33..118 CDD:197585 43/84 (51%)
C2H2 Zn finger 712..729 CDD:275368 1/16 (6%)
C2H2 Zn finger 742..763 CDD:275368 0/20 (0%)
lolaNP_788308.3 BTB 22..117 CDD:279045 47/94 (50%)
BTB 33..117 CDD:197585 43/83 (52%)
C2H2 Zn finger 905..925 CDD:275368
C2H2 Zn finger 935..955 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.010

Return to query results.
Submit another query.