DRSC/TRiP Functional Genomics Resources

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Protein Alignment br and bab1

DIOPT Version :9

Sequence 1:NP_001162638.2 Gene:br / 44505 FlyBaseID:FBgn0283451 Length:1011 Species:Drosophila melanogaster
Sequence 2:NP_728565.1 Gene:bab1 / 38116 FlyBaseID:FBgn0004870 Length:977 Species:Drosophila melanogaster


Alignment Length:1034 Identity:247/1034 - (23%)
Similarity:362/1034 - (35%) Gaps:357/1034 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TQHFCLRWNNYQSSITSAFENLRDDEAFVDVTLACEGRSIKAHRVVLSACSPYFRELLKSTPCKH 68
            :|.|||||||||:::|:.|:.|..:|.||||||||:|||:|||::|||||||||:.||..|||:|
  Fly    99 SQQFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQTLLAETPCQH 163

  Fly    69 PVILLQDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQQQAEDTHSHLAQIQNL 133
            |:::::|||:.||.|:|||:|.||:||.|..:...|:.||:|:|.||    |:.||...|.....
  Fly   164 PIVIMRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGL----ADVTHMEAATAAAA 224

  Fly   134 ANSGGRTPL----NTHTQSLPHPHHGSLHD----------------DGGS---STLFSRQGAG-- 173
            |.|..|.|.    :|.|....|.......:                |...   |.|..:||..  
  Fly   225 AASSERMPSSPKESTSTSRTEHDREREAEELLAFMQPEKKLRTSDWDPAELRLSPLERQQGRNVR 289

  Fly   174 -----------SP--PPTAVPSLPSHINNQLLKRMAMMHRSSA--------AAAAEETSHAFKRL 217
                       :|  ||:.:.||.:....:|.::.....|..:        ..::..|..|.:||
  Fly   290 KRRWPSADTIFNPPAPPSPLSSLIAAERMELEQKERERQRDCSLMTPPPKPPMSSGSTVGATRRL 354

  Fly   218 RGSDNSL----------PLSGAVGSGSNNNSPD-----------LP-PLHA-RSASPQQTPADFS 259
            ..:.::|          |||.:  |..::.||.           || |||. ..|||...|:..:
  Fly   355 ETAIHALDMPSPAATPGPLSRS--SRPHSQSPQQQQAQQQGQLPLPLPLHPHHHASPAPHPSQTA 417

  Fly   260 TIKHH-----NNNNTP-------------------PLKEEK-------RNGPTGNGNSGNGNGNG 293
            ...||     .::..|                   |..|.:       .:|..|.|..|.|.|..
  Fly   418 GSAHHPASPAGDSRFPLGPAAAMAAARELSGLGPGPSAEPRLPPPPPHHHGGGGVGGGGVGGGGA 482

  Fly   294 NGASNGNGISISDKLGSLTPSPLARAGADDVKSEPMDMVCSNNNA--------NANDEH------ 344
            .|..:|.|.|::|.| .:.|..     |:.::.|....:..|::|        .|.|.:      
  Fly   483 GGVGSGGGSSLADDL-EIKPGI-----AEMIREEERAKMMENSHAWMGATGSTLAADSYQYQLQS 541

  Fly   345 -------SNDSTGEHDANRSSSGDGGKGSLSSGNDEEIG--------DGLASHHAA-------PQ 387
                   :|.:...|...|.      :|.|.|...|.:.        :||:...||       |.
  Fly   542 MWQKCWNTNQNLMHHMRFRE------RGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPT 600

  Fly   388 FIM-SPAENKMFHAAAFNFPNIDPSA-------LLGL----------------NTQLQQSGDLA- 427
            |:: :...:.|...:....|::.|..       |||:                :|:..:...|| 
  Fly   601 FVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDIKDESLAA 665

  Fly   428 -VSPQGGSTGSL------LSGVIVPGGSG---GTPSNSSSNNNNNNSNN----QQQKVEQQSS-- 476
             :.|.|..:.:.      ||   .||.||   |.||:.:..|.:.....    .:|.:.|:::  
  Fly   666 HMPPYGRHSPAFPLQDLPLS---YPGASGALAGAPSSMACPNGSGPQTGVGVAGEQHMSQETAAA 727

  Fly   477 ----PHQLLQQQHHST---------PHTNSPQLKQEQPKSGGGSCKSSDLHIAAGSERSLSRSSQ 528
                .|.:.||...:.         ||          |..|||   ..::..|||...|:   |.
  Fly   728 VAAVAHNIRQQMQMAAVPPGLFNLPPH----------PGVGGG---VGNVPGAAGGRASI---SP 776

  Fly   529 GMPDAGGHSATPSPTAAYHKRERERERERERERERERERSLDHERDLERPGGTGSPPPPPPS--- 590
            .:....|....|||.                                   |..|..|..|||   
  Fly   777 ALSSGSGPRHAPSPC-----------------------------------GPAGLLPNLPPSMAV 806

  Fly   591 --HHSHFGQHPLSLLPSHHQLHATHHELSAAAAHHAHAHAHAAHAHALARAGSPMEHHHLLHHRR 653
              ||             ..|..|.||.:.........||.|    |...:.....:.||...|:.
  Fly   807 ALHH-------------QQQQQAAHHHMQQLHLQQQQAHLH----HHQQQQQQQQQQHHQGGHQV 854

  Fly   654 ASLSPSGAVSSASGAGGRGGGAGGPGGPGGSLLSSVRAQDVAQANRLLLPLPLNACHRCDVCGKL 718
            |..|..||.||:|.:....|....|......|.|        :..||..||           |.|
  Fly   855 AHKSGFGASSSSSASSSSMGQHHAPKAKSSPLRS--------ETPRLHSPL-----------GDL 900

  Fly   719 LSTKLTLKRHKEQQHL--QPLNNAVCNLCHKVFRTLNSLNNHKSIYHRRQKNHHSYFHHGAGVSQ 781
            .....:.||......|  :.|...|                                  ||.||.
  Fly   901 GLDMASYKREFSPSRLFAEDLAELV----------------------------------GASVSS 931

  Fly   782 AGSPGSRLHQSLSSLSAAAAAANNSVNVGGGSVGGAGGNAVAAAAAAAAAAAELLLSPI 840
                        ||.|||||.|....:.|..|.      |..|.|.:::::..:.:.||
  Fly   932 ------------SSSSAAAATAPPERSAGAASA------ATGADAPSSSSSGGIKVEPI 972

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brNP_001162638.2 BTB 22..118 CDD:279045 55/95 (58%)
BTB 33..118 CDD:197585 50/84 (60%)
C2H2 Zn finger 712..729 CDD:275368 4/16 (25%)
C2H2 Zn finger 742..763 CDD:275368 0/20 (0%)
bab1NP_728565.1 BTB 117..216 CDD:279045 57/102 (56%)
BTB 128..213 CDD:197585 51/88 (58%)
HTH_psq 569..614 CDD:283007 8/44 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.010

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