DRSC/TRiP Functional Genomics Resources

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Protein Alignment br and CG8924

DIOPT Version :9

Sequence 1:NP_001162638.2 Gene:br / 44505 FlyBaseID:FBgn0283451 Length:1011 Species:Drosophila melanogaster
Sequence 2:NP_573091.1 Gene:CG8924 / 32557 FlyBaseID:FBgn0030710 Length:514 Species:Drosophila melanogaster


Alignment Length:590 Identity:140/590 - (23%)
Similarity:218/590 - (36%) Gaps:144/590 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TQHFCLRWNNYQSSITSAFENLRDDEAFVDVTLACEGRSIKAHRVVLSACSPYFRELLKSTPCKH 68
            ||.||:|||::..||.:||..|...:.||||||||||:.:..||:||:|||.||..:|...||||
  Fly     5 TQEFCVRWNSHLGSIGAAFPQLLAGQRFVDVTLACEGQQVHCHRLVLAACSTYFEAILAEHPCKH 69

  Fly    69 PVILL-QDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQQQAEDTHSHLAQIQN 132
            |||:| :::...::.|||:|:|.|||||.|..|...|:.||.|::.||...:|...:.   ::|.
  Fly    70 PVIILPREIKLWEIQALVDFMYKGEVNVTQAGLGQLLRCAEQLQIRGLYGSEAPINYK---KLQQ 131

  Fly   133 LANSGGRTPLNTHTQSLPHPHHGSLHDDGGSSTLFSRQGAGSPPPTAVPSLPSHINNQLLKRMAM 197
            .:....:.|..|..:|..|.......|...:||..:.....|.||..|    :|....:|||...
  Fly   132 ASLEAAKDPAATTARSFKHVDSAETDDAATNSTTSTTMTTSSAPPLPV----NHQQPTVLKRQNP 192

  Fly   198 MHRSSAAAAAEETSHAFKRLRGSDNSLPLSGAVGS---GSNNNSPDLPPLHARSASPQQTPADFS 259
            ..|.......::......::.||:...| |.|..:   ||::|:|      ....|..:.|    
  Fly   193 DARQQQQQQQQQQVQQRPQINGSNAQQP-SKATSTNVLGSHSNAP------TEDDSGDEVP---- 246

  Fly   260 TIKHHNNNNTPPLKEEKRNGPTGNGNSGNGNGNGNGASNGNGISISDKLGSLTPSPLARAGADDV 324
                                     |:.|..|......|.:..::.:|:........||......
  Fly   247 -------------------------NNWNAYGEQFDDCNISAQAVDNKMNVHLSLQQARMQMQLQ 286

  Fly   325 KSEPMDMVCSNNNANANDEHSNDSTGEHDANRSSS-------GDGGKGSL----------SSGND 372
            :.:.:|       :|..|:|  :....||.|..||       |.|...||          |.|..
  Fly   287 QQQYLD-------SNVEDDH--NYVAAHDENNDSSFATGVPCGSGLSLSLDTDLDTSANTSGGLS 342

  Fly   373 EEIGDGLASHH-------AAPQFIMSPAENKMFHAAA--FNFP-----------NIDPSALLGLN 417
            ....||..|:.       :..|.....::.:.|...:  ||.|           .|.|....|..
  Fly   343 HSSIDGYTSYKRVRRSEASLAQAAKCVSKGETFQTVSNMFNIPVSTIRFYMARKGILPKRKRGRG 407

  Fly   418 TQLQQSGDLAVSPQGGSTGSLLSGVIVPGGSGGTPSNSSSNNNNNNSNNQQQKVEQQSSPHQLLQ 482
            .  ..:|::.::...|...::.:.:..|      |::...:.|                      
  Fly   408 A--SHAGNIIITTNSGKLSTVPASITHP------PAHPHIHTN---------------------- 442

  Fly   483 QQHHSTPHTNSPQLKQEQPKSGGGSCKSSDLHIAAGSERSLSRSSQGMPDAGGHS-----ATPSP 542
                ..|||.|.|:..:            .||:.||...:...:|.....|...|     ||...
  Fly   443 ----PLPHTQSQQMSMD------------SLHLKAGIANTSGSNSPATATATSMSPSFDMATTGD 491

  Fly   543 TAAYH 547
            ...:|
  Fly   492 IVPFH 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
brNP_001162638.2 BTB 22..118 CDD:279045 48/96 (50%)
BTB 33..118 CDD:197585 44/85 (52%)
C2H2 Zn finger 712..729 CDD:275368
C2H2 Zn finger 742..763 CDD:275368
CG8924NP_573091.1 BTB 25..117 CDD:279045 45/91 (49%)
BTB 34..117 CDD:197585 42/82 (51%)
MerR 378..407 CDD:278788 6/28 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
66.020

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