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Protein Alignment Surf1 and Surf4
DIOPT Version :9
Sequence 1: | NP_524758.1 |
Gene: | Surf1 / 44498 |
FlyBaseID: | FBgn0029117 |
Length: | 300 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001029040.1 |
Gene: | Surf4 / 619346 |
RGDID: | 1561980 |
Length: | 269 |
Species: | Rattus norvegicus |
Alignment Length: | 78 |
Identity: | 18/78 - (23%) |
Similarity: | 29/78 - (37%) |
Gaps: | 17/78 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 96 NKQLSTAPVALPDDLTDLAQMEYRLVKIRGRFLHDKEMRLGPRSLIRPDGVETQGGLFSQRDS-- 158
|..:.|| :|..| :.:::..::| ....||...|....||:........|||.
Rat 4 NDLMGTA-----EDFAD------QFLRVTKQYL-PHVARLCLISTFLEDGIRMWFQWSEQRDYID 56
Fly 159 ---GNGYLIVTPF 168
..|||:.:.|
Rat 57 TTWSCGYLLASSF 69
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Surf1 | NP_524758.1 |
SURF1 |
74..289 |
CDD:119401 |
18/78 (23%) |
Surf4 | NP_001029040.1 |
SURF4 |
4..269 |
CDD:111019 |
18/78 (23%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
192 |
1.000 |
Domainoid score |
I3116 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm45501 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_103106 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.810 |
|
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