DRSC/TRiP Functional Genomics Resources

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Protein Alignment Surf1 and surf1

DIOPT Version :9

Sequence 1:NP_524758.1 Gene:Surf1 / 44498 FlyBaseID:FBgn0029117 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_001073642.1 Gene:surf1 / 557970 ZFINID:ZDB-GENE-041108-2 Length:309 Species:Danio rerio


Alignment Length:317 Identity:127/317 - (40%)
Similarity:178/317 - (56%) Gaps:35/317 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIRLGNQ-----MCRQVAFNIQTVFRNPGTANNPRLITRK--MTQQRPPV---------NWTTSI 49
            |:.:.||     .|..:....:|:|           :||:  ..:|..||         ..:||.
Zfish     7 MLMISNQTFKILRCSALFSPRRTLF-----------VTRQSLFRRQDAPVLRYNLARFSQQSTST 60

  Fly    50 PNQAAKDKEKIAPLGWFLLLIPATTFGLGCWQVKRKIWKEQLIKDLNKQLSTAPVALPDDLTDLA 114
            .....|.::..  |.|||||||.|||.||.|||||:.||.:||.:|....::.|:.||.|..::.
Zfish    61 VEGTKKGEDTF--LKWFLLLIPVTTFCLGTWQVKRRKWKLELISELQSLTTSVPIPLPVDTMEIK 123

  Fly   115 QMEYRLVKIRGRFLHDKEMRLGPRSLIRPDGVETQGGLFSQRDSG-NGYLIVTPFQLADRDDIVL 178
            |:|||.|.:||.|.|.||:.:.|||.:.|:....:.|..|  .|| :|..::|||...|....:|
Zfish   124 QLEYRRVTVRGHFDHSKELYILPRSPVDPEREAREAGRIS--SSGESGANVITPFFCTDLGITIL 186

  Fly   179 VNRGWVSRKQVEPETRPLGQQQAEVELTAVVRKGEARPQFTPDH--KGNVYLYRDLARMCAATGA 241
            ||||:|.:.:::||||..||...:|:|..|||..|.|..|.|::  :.|.:.||||..|...|||
Zfish   187 VNRGYVPKNKIKPETRTKGQVIEDVDLVGVVRLTEQRKPFVPENNVEANRWHYRDLEAMAKVTGA 251

  Fly   242 APVFLDAVYDPQTAAHAPIGGQTRVTLRNDHLSYLVTWFSLSAATSFLWYRQIVKRI 298
            ..:|:|||.| .|....||||||||||||:||.|::||:.|.||||::||.:.:.||
Zfish   252 EEIFIDAVLD-STVPGGPIGGQTRVTLRNEHLQYVITWYGLCAATSYMWYAKFIMRI 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Surf1NP_524758.1 SURF1 74..289 CDD:119401 100/217 (46%)
surf1NP_001073642.1 SURF1 83..298 CDD:119401 100/217 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575135
Domainoid 1 1.000 189 1.000 Domainoid score I3234
eggNOG 1 0.900 - - E1_COG3346
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2387
Inparanoid 1 1.050 222 1.000 Inparanoid score I3517
OMA 1 1.010 - - QHG55729
OrthoDB 1 1.010 - - D491252at33208
OrthoFinder 1 1.000 - - FOG0003659
OrthoInspector 1 1.000 - - oto40437
orthoMCL 1 0.900 - - OOG6_103106
Panther 1 1.100 - - LDO PTHR23427
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1335
SonicParanoid 1 1.000 - - X4077
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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