DRSC/TRiP Functional Genomics Resources

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Protein Alignment Surf1 and Surf1

DIOPT Version :9

Sequence 1:NP_524758.1 Gene:Surf1 / 44498 FlyBaseID:FBgn0029117 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_038705.2 Gene:Surf1 / 20930 MGIID:98443 Length:306 Species:Mus musculus


Alignment Length:260 Identity:121/260 - (46%)
Similarity:163/260 - (62%) Gaps:5/260 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PVNWTTSIPNQAAKDKEKIAPLGWFLLLIPATTFGLGCWQVKRKIWKEQLIKDLNKQLSTAPVAL 106
            |....:|....||...|..:.|.|||||||||.||||.|||:|:.||.:||.:|..::...|:.|
Mouse    48 PRRCCSSTAETAAAKAEDDSFLQWFLLLIPATAFGLGTWQVQRRKWKLKLIAELESRVMAEPIPL 112

  Fly   107 PDDLTDLAQMEYRLVKIRGRFLHDKEMRLGPRSLIRPDGVETQGGLFSQRDSGNGYLIVTPFQLA 171
            |.|..:|..:|||.||:||.|.|.||:.:.||:::.|.......|..|..:||..  :||||..:
Mouse   113 PADPMELKNLEYRPVKVRGHFDHSKELYIMPRTMVDPVREARDAGRLSSTESGAH--VVTPFHCS 175

  Fly   172 DRDDIVLVNRGWVSRKQVEPETRPLGQQQAEVELTAVVRKGEARPQFTPDH--KGNVYLYRDLAR 234
            |....:|||||:|.||:|.||||..||...||:|..:||..|.|..|.|::  :.|.:.||||..
Mouse   176 DLGVTILVNRGFVPRKKVNPETRQKGQVLGEVDLVGIVRLTENRKPFVPENSPERNHWYYRDLEA 240

  Fly   235 MCAATGAAPVFLDAVYDPQTAAHAPIGGQTRVTLRNDHLSYLVTWFSLSAATSFLWYRQIVKRIP 299
            |...|||.|:|:||.:. .||...||||||||||||:|:.|::||:.|.||||:||:::.|:|.|
Mouse   241 MAKITGADPIFIDADFH-STAPGGPIGGQTRVTLRNEHMQYILTWYGLCAATSYLWFQKFVRRTP 304

  Fly   300  299
            Mouse   305  304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Surf1NP_524758.1 SURF1 74..289 CDD:119401 101/216 (47%)
Surf1NP_038705.2 SURF1 81..294 CDD:119401 100/214 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832220
Domainoid 1 1.000 194 1.000 Domainoid score I3173
eggNOG 1 0.900 - - E1_COG3346
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2387
Inparanoid 1 1.050 228 1.000 Inparanoid score I3456
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55729
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003659
OrthoInspector 1 1.000 - - oto93655
orthoMCL 1 0.900 - - OOG6_103106
Panther 1 1.100 - - LDO PTHR23427
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1335
SonicParanoid 1 1.000 - - X4077
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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