DRSC/TRiP Functional Genomics Resources

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Protein Alignment Surf1 and sft-1

DIOPT Version :9

Sequence 1:NP_524758.1 Gene:Surf1 / 44498 FlyBaseID:FBgn0029117 Length:300 Species:Drosophila melanogaster
Sequence 2:NP_497657.1 Gene:sft-1 / 175415 WormBaseID:WBGene00004787 Length:323 Species:Caenorhabditis elegans


Alignment Length:255 Identity:98/255 - (38%)
Similarity:139/255 - (54%) Gaps:15/255 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 KDKEKIAPLGW-----FLLLIPATTFGLGCWQVKRKIWKEQLIKDLNKQLSTAPVALPDDLT--D 112
            |.|:....:.|     .:|.||...|.||.||..|..||..||:.|..:|:.....||:||:  .
 Worm    71 KSKKSKKSIKWSTGSVLMLTIPVFAFSLGIWQTFRLKWKLDLIEHLKGRLNQTAQELPEDLSCES 135

  Fly   113 LAQMEYRLVKIRGRFLHDKEMRLGPRSLIRPDGVETQ---GGLFSQRD-SGNGYLIVTPFQLADR 173
            |..:||..|.:.|.|||:||..:.||....| |.:|.   |.:.|:.: |.:|..::|||:|.:.
 Worm   136 LEPLEYCRVTVTGEFLHEKEFIISPRGRFDP-GKKTSAAAGSMLSENEMSSHGGHLITPFRLKNS 199

  Fly   174 DDIVLVNRGWVSRKQVEPETRPLGQQQAEVELTAVVRKGEARPQFTPDH--KGNVYLYRDLARMC 236
            ..|:|:||||:.....:||||.....:..:.|.|:|||.|.||||...:  :..|:.||||.:|.
 Worm   200 GKIILINRGWLPSFYFDPETRQKTNPRGTLTLPAIVRKTEKRPQFVGQNVPEQGVWYYRDLNQMA 264

  Fly   237 AATGAAPVFLDAVYDPQTAAHAPIGGQTRVTLRNDHLSYLVTWFSLSAATSFLWYRQIVK 296
            ...|..||.|||.|: .|....||||||.:.:||:||:||.|||:|:..|..:|..:..|
 Worm   265 KHYGTEPVLLDAAYE-TTVPGGPIGGQTNINVRNEHLNYLTTWFTLTLVTMLMWIHKFRK 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Surf1NP_524758.1 SURF1 74..289 CDD:119401 90/222 (41%)
sft-1NP_497657.1 SURF1 96..316 CDD:119401 90/221 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156777
Domainoid 1 1.000 159 1.000 Domainoid score I2494
eggNOG 1 0.900 - - E1_COG3346
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2387
Inparanoid 1 1.050 168 1.000 Inparanoid score I2776
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55729
OrthoDB 1 1.010 - - D491252at33208
OrthoFinder 1 1.000 - - FOG0003659
OrthoInspector 1 1.000 - - oto18807
orthoMCL 1 0.900 - - OOG6_103106
Panther 1 1.100 - - LDO PTHR23427
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1335
SonicParanoid 1 1.000 - - X4077
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

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