DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Surf1 and Surf1

DIOPT Version :10

Sequence 1:NP_524758.1 Gene:Surf1 / 44498 FlyBaseID:FBgn0029117 Length:300 Species:Drosophila melanogaster
Sequence 2:XP_316569.4 Gene:Surf1 / 1277131 VectorBaseID:AGAMI1_007758 Length:302 Species:Anopheles gambiae


Alignment Length:260 Identity:137/260 - (52%)
Similarity:187/260 - (71%) Gaps:1/260 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 TQQRPPVNWTTSIPNQAAKDKEKIAPLGWFLLLIPATTFGLGCWQVKRKIWKEQLIKDLNKQLST 101
            |:.:|.::....:.:.:......|:|.||.||:|||||||||||||.||.|||.||.:|.:::..
Mosquito    40 TRTKPRISPPPKLKSSSTDSTAGISPFGWGLLIIPATTFGLGCWQVYRKQWKEGLIDELERKIHM 104

  Fly   102 APVALPDDLTDLAQMEYRLVKIRGRFLHDKEMRLGPRSLIRPDGVETQGGLFSQRDSGNGYLIVT 166
            :||.:|||||.|.:|||:.|.:||:||||:|..||||:.|:.....|.||||||:::..|:|::|
Mosquito   105 SPVPIPDDLTALNEMEYQTVTVRGQFLHDQEFHLGPRACIQHGDSHTAGGLFSQKEASIGFLVIT 169

  Fly   167 PFQLADRDDIVLVNRGWVSRKQVEPETRPLGQQQAEVELTAVVRKGEARPQFTPDHKGNVYLYRD 231
            ||:|..|||.:|:|||||.::.::|.|||.||....|||..|||..|.||||||..:|.:::|||
Mosquito   170 PFKLEGRDDKILINRGWVPKRYLDPATRPEGQVTGTVELQGVVRLPENRPQFTPKQRGAIFMYRD 234

  Fly   232 LARMCAATGAAPVFLDAVYDPQTAAHAPIGGQTRVTLRNDHLSYLVTWFSLSAATSFLWYRQIVK 296
            :.||.|.:|:.|.:|||.. ..|..|.|:||||||||||:||||:|||||||..|::||:||||:
Mosquito   235 VERMAAISGSEPYYLDATV-ASTVPHGPVGGQTRVTLRNEHLSYIVTWFSLSGFTTWLWFRQIVR 298

  Fly   297  296
            Mosquito   299  298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Surf1NP_524758.1 SURF1 74..289 CDD:119401 119/214 (56%)
Surf1XP_316569.4 None

Return to query results.
Submit another query.