DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tollo and RLP13

DIOPT Version :10

Sequence 1:NP_524757.1 Gene:Tollo / 44497 FlyBaseID:FBgn0029114 Length:1346 Species:Drosophila melanogaster
Sequence 2:NP_001322432.1 Gene:RLP13 / 843757 AraportID:AT1G74170 Length:1068 Species:Arabidopsis thaliana


Alignment Length:1200 Identity:264/1200 - (22%)
Similarity:413/1200 - (34%) Gaps:377/1200 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 VIPIFGAALSKTVLYQAPDE----CRWSGGGEHDITLVCHLRT---------INSELEN--TNFS 65
            :||:.....:..||....|.    |:|.|       :.|:.::         |...:||  .|.|
plant    42 LIPLNAGEWNDNVLSWTNDTKSDCCQWMG-------VECNRKSGRITNIAFGIGFIIENPLLNLS 99

  Fly    66 VIQPQNTVR-LRL----ECNDALFFQSSLSPD--SFRSLVELRD--------------------- 102
            ::.|...|| |.|    .|.|..|  |.|..|  .::||..||:                     
plant   100 LLHPFEDVRSLDLSSSRSCEDCGF--SGLFDDVEGYKSLSRLRNLEILDLSSHRFNNSIFPFLNA 162

  Fly   103 ---LTIEYCKLGNLTD----GSFRGLQELRNLTIRTH--NGDWSTMSLEMASNSFVEFRQLERLD 158
               ||..:....|:..    ..|:.|..|.:|.:|.:  ||...|...    ||...||:||.||
plant   163 ATSLTTLFLTYNNMHSPFLVKEFKDLTNLEHLDLRGNRFNGSIPTQDY----NSLRRFRKLEILD 223

  Fly   159 LSLN-------------------NIWLIPDGMVCPLKSLQHLNASYNKIQDISNFYFSASLSSRK 204
            ||.|                   ::|....|...|.|.|:.|  :..::.|:|...|:.|:..| 
plant   224 LSDNLFNSRIFPFLNSATSLKSLSLWGNNMGGPFPAKELRDL--TNVELLDLSRNRFNGSIPVR- 285

  Fly   205 ARVCGSTLQSLDLSANKMVS--------LPTAMLSAL---GRLTHLNMAKNSMSFLADRAFEGLL 258
            |......|::||||.|:..|        ..|..||..   ..:..|.::.|.::.........|.
plant   286 ALFALRKLKALDLSDNEFSSSVELQGKFAKTKPLSGTCPWKNMEELKLSNNKLAGQFPLCLTSLT 350

  Fly   259 SLRVVDLSANRLTSLPPELFAETKQLQEIYL-RNNSINVLAPGIFGELAELLVLDLASN------ 316
            .|||:|||:|:||...|...|..:.|:.:.| .||.....:.|:...|::|.||.|.|.      
plant   351 GLRVLDLSSNQLTGNVPSALANLESLEYLSLFGNNFEGFFSLGLLANLSKLKVLRLDSQSNSLEV 415

  Fly   317 ELNSQWINAATFVGLKRLMMLDLSANKISRLE--AHIFRPLASLQILKLEDNYI-DQLPGGIFAD 378
            |..:.|         |....|.:.|.:...||  .|.......|..:.|.||.| ...|..:..:
plant   416 EFETSW---------KPKFQLVVIALRSCNLEKVPHFLLHQKDLHHVDLSDNQIHGNFPSWLLEN 471

  Fly   379 LTNLHTLILSRNRISVIEQRTLQGLKNLLVLSLDFNRISRMDQRSLVN----CSQLQDLHLNDNK 439
            .|.|..|:|..|  |....:..:...|||.|::..|:.:.:   .|.|    ...|..::|..|.
plant   472 NTKLEVLLLQNN--SFTSFQLPKSAHNLLFLNVSVNKFNHL---FLQNFGWILPHLVCVNLAYNG 531

  Fly   440 LQA-VPEALAHVQLLKTLDVGENMISQIENTSITQLESLYGLRMTENSLTHIRRGVFDRMSSLQI 503
            .|. :|.:|.:::.::.||:..|                   |..........:|.:    :|.|
plant   532 FQGNLPSSLDNMKSIEFLDLSHN-------------------RFHGKLPRRFLKGCY----NLTI 573

  Fly   504 LNLSQNKLKS---IEAGSLQRNSQLQAIRLDGNQLKSIAGL-FTELPNLVWLNISGNRLEKFDYS 564
            |.||.|||..   .||.:..|   |..:.:|.|......|. |..||:|..|:||.|:|.    .
plant   574 LKLSHNKLSGEVFPEAANFTR---LWVMSMDNNLFTGNIGKGFRSLPSLNVLDISNNKLT----G 631

  Fly   565 HIPIGLQWLDVRANRIT-QLGNYFEIESELSLSTFDASYNLLTEITAS----SIPNSVE------ 618
            .||   .|:..|..... ||.|.. :|.|:..|.|:.||..|.:::::    .||..|.      
plant   632 VIP---SWIGERQGLFALQLSNNM-LEGEIPTSLFNISYLQLLDLSSNRLSGDIPPHVSSIYHGA 692

  Fly   619 VLYLNDNQISKIQPYTFFKKPNLTRVDLVRNRLTTLEPNALRLSPIAEDREIPEFYIGHNAYECD 683
            ||.|.:|.:|.:.|.|...  |:..:||..|||:               ..:|||          
plant   693 VLLLQNNNLSGVIPDTLLL--NVIVLDLRNNRLS---------------GNLPEF---------- 730

  Fly   684 CNLDWLQKVNRESRTQPQLMDLDQIHCRLAYARGSSHVSLIEAKSDDFLCKYASHCFALCHCCDF 748
                    :|                        :.::|::..:.::|..: ..|.|  |...:.
plant   731 --------IN------------------------TQNISILLLRGNNFTGQ-IPHQF--CSLSNI 760

  Fly   749 QACDCKM-----ECPDRCSCYHDQSWTSNVVDCSRASYEQTLPSHIPMDSTQLYLDG-------N 801
            |..|...     ..|   ||..:.|:.....|   .||...:||........:|.:.       |
plant   761 QLLDLSNNKFNGSIP---SCLSNTSFGLRKGD---DSYRYDVPSRFGTAKDPVYFESLLMIDEFN 819

  Fly   802 NFRELQSH------------AFIGRKRLKVL---HLNHSRIEVLHNRTFYGLLELEVLQLQSNQL 851
            ...|..|.            |::| ..||:|   .|:.:.:.........||:|||.|.|..|.|
plant   820 MVNETNSQTKIEFATKHRYDAYMG-GNLKLLFGMDLSENELSGEIPVELGGLVELEALNLSHNNL 883

  Fly   852 KALNGNEFQGLDNLQELYLQHNAIATIDTLTFTHLYHLKILRLDHNAITSFA------------- 903
            ..:....|.||.|::.|.|..|.:.....|..|.:..|.:..:.:|.::...             
plant   884 SGVILESFSGLKNVESLDLSFNRLQGPIPLQLTDMISLAVFNVSYNNLSGIVPQGRQFNTFETQS 948

  Fly   904 ----------------------------------------VWNFLPSYLNELR--LAS----NPW 922
                                                    .|:|:.:|:..|.  |||    :||
plant   949 YFGNPLLCGKSIDISCASNNFHPTDNGVEADESTVDMESFYWSFVAAYVTILLGILASLSFDSPW 1013

  Fly   923 TCSCEFIDKLRDYINRHEYVVDKLKMKCDVISGNSTQQMVIYPGSGEPASLPVVQCSQTLPLGLD 987
            :         |.:.    |:||...:|        .:.|:....:|       .:||..|     
plant  1014 S---------RAWF----YIVDAFVLK--------VRNMLWQNTAG-------TKCSYVL----- 1045

  Fly   988 NNFNYAEQAGGENASNATSTKMILNQPPKL 1017
                         .|.::.:.::|.:||.|
plant  1046 -------------VSLSSPSVVVLLKPPAL 1062

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TolloNP_524757.1 LRR 54..400 CDD:443914 109/433 (25%)
leucine-rich repeat 100..123 CDD:275380 7/50 (14%)
leucine-rich repeat 124..144 CDD:275380 6/21 (29%)
leucine-rich repeat 154..177 CDD:275380 10/41 (24%)
leucine-rich repeat 178..201 CDD:275380 6/22 (27%)
leucine-rich repeat 212..235 CDD:275380 10/33 (30%)
leucine-rich repeat 236..259 CDD:275380 3/22 (14%)
LRR 239..634 CDD:443914 110/424 (26%)
leucine-rich repeat 260..283 CDD:275380 11/22 (50%)
leucine-rich repeat 284..307 CDD:275380 6/23 (26%)
leucine-rich repeat 308..333 CDD:275380 7/30 (23%)
leucine-rich repeat 334..357 CDD:275380 5/24 (21%)
leucine-rich repeat 358..381 CDD:275380 6/23 (26%)
leucine-rich repeat 382..405 CDD:275380 5/22 (23%)
leucine-rich repeat 406..429 CDD:275380 6/26 (23%)
leucine-rich repeat 430..452 CDD:275380 6/22 (27%)
leucine-rich repeat 453..500 CDD:275380 5/46 (11%)
leucine-rich repeat 501..521 CDD:275380 10/22 (45%)
leucine-rich repeat 525..547 CDD:275380 6/22 (27%)
leucine-rich repeat 548..573 CDD:275380 8/24 (33%)
leucine-rich repeat 604..640 CDD:275380 11/45 (24%)
LRR_8 616..>660 CDD:404697 14/49 (29%)
leucine-rich repeat 641..688 CDD:275380 8/46 (17%)
leucine-rich repeat 689..816 CDD:275380 23/150 (15%)
LRR <794..>920 CDD:443914 37/206 (18%)
leucine-rich repeat 817..864 CDD:275380 16/49 (33%)
leucine-rich repeat 865..888 CDD:275380 5/22 (23%)
leucine-rich repeat 889..910 CDD:275380 4/73 (5%)
TIR 1076..1211 CDD:214587
RLP13NP_001322432.1 LRRNT_2 31..74 CDD:462411 8/38 (21%)
PLN03150 <101..206 CDD:178695 25/106 (24%)
leucine-rich repeat 142..165 CDD:275380 0/22 (0%)
leucine-rich repeat 166..190 CDD:275380 5/23 (22%)
PLN03150 <180..259 CDD:178695 21/82 (26%)
leucine-rich repeat 191..218 CDD:275380 9/30 (30%)
leucine-rich repeat 219..267 CDD:275380 13/49 (27%)
PLN00113 238..>957 CDD:215061 189/838 (23%)
leucine-rich repeat 268..292 CDD:275380 6/24 (25%)
leucine-rich repeat 293..318 CDD:275380 8/24 (33%)
leucine-rich repeat 319..351 CDD:275380 5/31 (16%)
leucine-rich repeat 352..375 CDD:275380 11/22 (50%)
leucine-rich repeat 376..400 CDD:275380 6/23 (26%)
leucine-rich repeat 450..474 CDD:275380 6/23 (26%)
leucine-rich repeat 475..521 CDD:275380 12/50 (24%)
leucine-rich repeat 522..545 CDD:275380 6/22 (27%)
leucine-rich repeat 546..570 CDD:275380 5/46 (11%)
leucine-rich repeat 571..594 CDD:275380 10/22 (45%)
leucine-rich repeat 595..618 CDD:275380 6/22 (27%)
leucine-rich repeat 619..642 CDD:275380 10/29 (34%)
leucine-rich repeat 643..666 CDD:275380 7/23 (30%)
leucine-rich repeat 667..691 CDD:275380 4/23 (17%)
leucine-rich repeat 713..735 CDD:275380 9/78 (12%)
leucine-rich repeat 736..757 CDD:275380 5/23 (22%)
leucine-rich repeat 760..781 CDD:275380 5/23 (22%)
leucine-rich repeat 849..872 CDD:275380 4/22 (18%)
leucine-rich repeat 873..896 CDD:275380 9/22 (41%)
leucine-rich repeat 897..918 CDD:275380 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.