DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tollo and AT5G05400

DIOPT Version :9

Sequence 1:NP_524757.1 Gene:Tollo / 44497 FlyBaseID:FBgn0029114 Length:1346 Species:Drosophila melanogaster
Sequence 2:NP_196159.1 Gene:AT5G05400 / 830422 AraportID:AT5G05400 Length:874 Species:Arabidopsis thaliana


Alignment Length:557 Identity:121/557 - (21%)
Similarity:206/557 - (36%) Gaps:161/557 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 GSFRGLQELRNLTIRTHNGD----WSTMSLEMASNSFVEFRQLERLDLSLNNIWLIPDGMVCPLK 176
            |.|.|: |...|:|...:.|    ..|.|..:.|..|.|..::.:.||.  ..| :..|::...|
plant   373 GVFSGI-EADILSILKFSYDDLKCEKTKSCFLFSALFPEDYEIGKDDLI--EYW-VGQGIILGSK 433

  Fly   177 SLQHLNASYNKIQDISNFY-FSASLSSRKARV--------------CGSTLQSLDLSANKMVSLP 226
            .:.:  ..|..|..::..| ...|.:..|.::              ||...|.     |.:|...
plant   434 GINY--KGYTIIGTLTRAYLLKESETKEKVKMHDVVREMALWISSGCGDQKQK-----NVLVVEA 491

  Fly   227 TAMLSALGRLTHLNMAKNSMSFLADRAFEGLLSLRVVDLSANRLTSLPPELFAETKQLQEIYLRN 291
            .|.|..:.::.. ..|...||.:.::..|...||                   ...:|:.:.||:
plant   492 NAQLRDIPKIED-QKAVRRMSLIYNQIEEACESL-------------------HCPKLETLLLRD 536

  Fly   292 NSINVLAPGIFGELAELLVLDLASNELNSQWINAATFVGLKRLMMLDLSANKISRLEAHIFRPLA 356
            |.:..::......:..|:||||:   ||...|...:|..|..|..|:||...|:.|...:: .|.
plant   537 NRLRKISREFLSHVPILMVLDLS---LNPNLIELPSFSPLYSLRFLNLSCTGITSLPDGLY-ALR 597

  Fly   357 SLQILKLEDNYIDQLPGGIFADLTNLHTLILSRNRISVIEQ--RTLQGLKNLLVLSLDFNRISRM 419
            :|..|.||..|:.:....|. ||.||..|.|..:.|.:.::  |.:|.:|:|.:|::        
plant   598 NLLYLNLEHTYMLKRIYEIH-DLPNLEVLKLYASGIDITDKLVRQIQAMKHLYLLTI-------- 653

  Fly   420 DQRSLVNCSQLQDLHLNDNKLQAVPEAL-----AHVQLLKT----------LDVGENMISQIENT 469
               :|.|.|.| ::.|.|.:..:..|.|     ::.|.||.          |::.::.|.:||..
plant   654 ---TLRNSSGL-EIFLGDTRFSSYTEGLTLDEQSYYQSLKVPLATISSSRFLEIQDSHIPKIEIE 714

  Fly   470 SITQLES-LYGLRMTEN-SLTHIRRGVFDRMSSLQ------------------------ILNLSQ 508
            ..:..|| :.|.|:..: |..::|:...|..:.|:                        |::.|:
plant   715 GSSSNESEIVGPRVRRDISFINLRKVRLDNCTGLKDLTWLVFAPHLATLYVVCLPDIEHIISRSE 779

  Fly   509 NK-------------LKSIEAGSLQRNSQLQAIRLDG---NQLKSI----AGLFTELP------- 546
            ..             .:.:|..:|:...||::|..|.   .:||.|    ....|:||       
plant   780 ESRLQKTCELAGVIPFRELEFLTLRNLGQLKSIYRDPLLFGKLKEINIKSCPKLTKLPLDSRSAW 844

  Fly   547 --NLV------WLNISGNRLEKFDYSHIPIGLQWLDV 575
              |:|      ||.                ||||.||
plant   845 KQNVVINAEEEWLQ----------------GLQWEDV 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TolloNP_524757.1 LRR_RI <85..281 CDD:238064 35/183 (19%)
leucine-rich repeat 100..123 CDD:275380 3/6 (50%)
leucine-rich repeat 124..144 CDD:275380 5/23 (22%)
LRR_8 152..222 CDD:290566 14/84 (17%)
leucine-rich repeat 154..177 CDD:275380 4/22 (18%)
leucine-rich repeat 178..201 CDD:275380 4/23 (17%)
LRR 210..656 CDD:227223 97/444 (22%)
leucine-rich repeat 212..235 CDD:275380 5/22 (23%)
leucine-rich repeat 236..259 CDD:275380 4/22 (18%)
leucine-rich repeat 260..283 CDD:275380 1/22 (5%)
LRR_RI 276..558 CDD:238064 80/359 (22%)
leucine-rich repeat 284..307 CDD:275380 4/22 (18%)
leucine-rich repeat 308..333 CDD:275380 10/24 (42%)
leucine-rich repeat 334..357 CDD:275380 7/22 (32%)
leucine-rich repeat 358..381 CDD:275380 8/22 (36%)
leucine-rich repeat 382..405 CDD:275380 6/24 (25%)
leucine-rich repeat 406..429 CDD:275380 4/22 (18%)
leucine-rich repeat 430..452 CDD:275380 5/26 (19%)
leucine-rich repeat 453..500 CDD:275380 13/58 (22%)
leucine-rich repeat 501..521 CDD:275380 5/56 (9%)
leucine-rich repeat 525..547 CDD:275380 9/37 (24%)
leucine-rich repeat 548..573 CDD:275380 6/30 (20%)
leucine-rich repeat 604..640 CDD:275380
leucine-rich repeat 641..688 CDD:275380
leucine-rich repeat 689..816 CDD:275380
LRR_8 815..875 CDD:290566
leucine-rich repeat 817..864 CDD:275380
LRR_8 864..921 CDD:290566
leucine-rich repeat 865..888 CDD:275380
leucine-rich repeat 889..910 CDD:275380
TIR 1076..1211 CDD:214587
AT5G05400NP_196159.1 NB-ARC 159..429 CDD:279299 16/59 (27%)
leucine-rich repeat 507..528 CDD:275378 5/39 (13%)
LRR_8 527..582 CDD:290566 16/57 (28%)
leucine-rich repeat 529..552 CDD:275378 4/22 (18%)
leucine-rich repeat 553..575 CDD:275378 10/24 (42%)
LRR_8 575..627 CDD:290566 18/53 (34%)
leucine-rich repeat 576..598 CDD:275378 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282372at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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