DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tollo and tlr4bb

DIOPT Version :10

Sequence 1:NP_524757.1 Gene:Tollo / 44497 FlyBaseID:FBgn0029114 Length:1346 Species:Drosophila melanogaster
Sequence 2:NP_997978.2 Gene:tlr4bb / 403132 ZFINID:ZDB-GENE-040219-9 Length:819 Species:Danio rerio


Alignment Length:944 Identity:231/944 - (24%)
Similarity:370/944 - (39%) Gaps:255/944 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   337 LDLSANKISRLEAHIFRPLASLQILKLEDNYIDQLPGGIFADLTNLHTLILSRNRISVIEQRTLQ 401
            ||.|.|.::.|...:|..:.:||:|.|...||.|:....|.::.||.||||:.|.|:.:....|.
Zfish    57 LDFSFNFLTSLHKRVFPVMLNLQLLDLTRCYIRQIEKDAFYNVKNLMTLILTGNPITYLAPECLN 121

  Fly   402 GLKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKLQA--VPEALAHVQLLKTLDVGENMIS 464
            .|..|..|.|...|:..: |..:.|.::||||.:..|.:|:  :|..::..:....||:..|.||
Zfish   122 SLYKLQRLVLVDVRLESL-QLQINNLTKLQDLKVGTNCIQSMTLPSFMSTFKDFSLLDLHANNIS 185

  Fly   465 QIENTSITQLESLYGLRMT----ENSLTHIRRGVFDR--MSSLQILNLSQNKLKSIEAGSLQRNS 523
            .|.......|..: |..||    .|.|.||..|.|..  :..|.:|           |..:..|:
Zfish   186 IIRMDHTAVLREI-GRNMTLILSRNPLIHIEPGAFKDVILRELHLL-----------AAFISFNA 238

  Fly   524 QLQAIRLDGNQLKSIAGLFTELPNLVWLNISGNRLEKFDYSHIPIGLQWL-DVRANRITQLGNYF 587
            |.:.       .|::.||..:.     |.:...|:::.....:|..|:.| .:..|.|..:...:
Zfish   239 QKEC-------HKALTGLTVDK-----LFVGRYRMDEKIKVSVPDYLEGLCSINFNEIYLVQKEW 291

  Fly   588 EIESELSLSTFDASYNLLTEITASS--------IP-NSVEVLYLNDNQISKIQ------------ 631
            . :||:.|  |....| .|:||...        || :.::.|||:|..:|.:.            
Zfish   292 S-DSEMHL--FRCMVN-ATKITIKKAYMNSMKHIPFHRLKELYLSDTGLSVVPFISHIPSLEKLV 352

  Fly   632 -----PYTF---FKKPNLTRVDLVRNRLTTLEPNALRLSPIAEDREIPEFYIGHNAYECDCNLDW 688
                 |.||   ...|.|..|||..|.|.                          .:|| |::.:
Zfish   353 MKSPFPITFTGVSDLPLLQYVDLSGNMLI--------------------------LHEC-CSILF 390

  Fly   689 LQKVNRESRTQPQLMDLDQIHCRLAYARGSSHVSLIEAKSDDFLCKYASHCFALCHCCDFQACDC 753
            .:..|      .|.::|.|          :|.::.:..                    .|.|.|.
Zfish   391 PRTPN------IQYLNLSQ----------NSEITFVNE--------------------PFSALDL 419

  Fly   754 KMECPDRCSCYHDQSWTSNVVDCSRASYEQTLPSHIPMDSTQLYLDGNNFRELQSHAFIGRKRLK 818
             :|..|    :|.   |..|:                     ::..| .|:.|::..::.....:
Zfish   420 -LEVLD----FHH---TKLVI---------------------VFYFG-FFKHLRNLKYLDISYTR 454

  Fly   819 VLHLNHSRIEVLHNRT--------FYG---------LLELEVLQLQSNQLKALNGNEFQGLDNLQ 866
            | |.|....:.|||.|        |.|         |..||||.:....::.::...|.|...|:
Zfish   455 V-HFNTLTFQDLHNLTVLKMAGNSFSGDKLSYFLQNLTSLEVLDISQCGIEKVSMRSFTGTQKLR 518

  Fly   867 ELYLQHNAIATIDTLTFTHLYHLKILRLDHNAITSFA--VWNFLPSYLNELRLASNPWTCSCEFI 929
            .|||..|.:..:|.||...|.||..:.:|.|:||:..  |...||..|:|..|:||...|||...
Zfish   519 HLYLSRNKLMVLDFLTQPELTHLTSVYIDKNSITTIPLDVLQKLPMNLSEFDLSSNSIDCSCSQT 583

  Fly   930 DKLRDYINRHEYVVDKLKMKCDVISGNSTQQMVIYPGSGEPASLPVVQCSQTLPLGLDNNFNYAE 994
            |.:...|.:...:.....::|...|.|:..:.:.:                              
Zfish   584 DFILWIIQKQNILKQLENIRCKTFSANTDFKAIDF------------------------------ 618

  Fly   995 QAGGENASNATSTKMILNQPPKLDY------IPILVAILTAFIFVMICISLVFIFRQEMRVWCHS 1053
                                 .:||      :.|::::: ...||::...|::.|      |.:.
Zfish   619 ---------------------DIDYCVHKKRLTIVLSVI-CVTFVVVLAILLYKF------WFYV 655

  Fly  1054 RFGVRLFYNAQKDVDKNEREKLFDAFVSYSSKDELFVNEELAPMLEMGEHRYKLCLHQRDFPVGG 1118
            ::...||...:   ...::|..:||||.:||.||.:|..||...||.|....:||||.|||..|.
Zfish   656 QYCFILFSGYR---SPGQQECSYDAFVIFSSYDEAWVMNELMENLENGVPPIQLCLHMRDFQAGK 717

  Fly  1119 YLPETIV-QAIDSSRRTIMVVSENFIKSEWCRFEFKSAHQSVLRDRRRRLIVIVLGEVPQKELDP 1182
            .:...|: :.|..||:.|:|||::||.|.||||||:.|....|.:|...:|:|:|.:|.:::...
Zfish   718 SIASNIIDEGIMGSRKIIVVVSQHFIDSSWCRFEFELAQSRFLMERNANIIIIILEDVAERKTKK 782

  Fly  1183 --DLRLYLKTNTYLQWG-DKL----FWQKLRFAL 1209
              .|..:||.||||:|. |.|    ||.:||.|:
Zfish   783 VFGLHKHLKKNTYLKWSRDPLSNMRFWIRLRKAI 816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TolloNP_524757.1 LRR 54..400 CDD:443914 22/62 (35%)
leucine-rich repeat 100..123 CDD:275380
leucine-rich repeat 124..144 CDD:275380
leucine-rich repeat 154..177 CDD:275380
leucine-rich repeat 178..201 CDD:275380
leucine-rich repeat 212..235 CDD:275380
leucine-rich repeat 236..259 CDD:275380
LRR 239..634 CDD:443914 84/331 (25%)
leucine-rich repeat 260..283 CDD:275380
leucine-rich repeat 284..307 CDD:275380
leucine-rich repeat 308..333 CDD:275380
leucine-rich repeat 334..357 CDD:275380 6/19 (32%)
leucine-rich repeat 358..381 CDD:275380 8/22 (36%)
leucine-rich repeat 382..405 CDD:275380 9/22 (41%)
leucine-rich repeat 406..429 CDD:275380 6/22 (27%)
leucine-rich repeat 430..452 CDD:275380 7/23 (30%)
leucine-rich repeat 453..500 CDD:275380 16/52 (31%)
leucine-rich repeat 501..521 CDD:275380 3/19 (16%)
leucine-rich repeat 525..547 CDD:275380 3/21 (14%)
leucine-rich repeat 548..573 CDD:275380 4/24 (17%)
leucine-rich repeat 604..640 CDD:275380 13/64 (20%)
LRR_8 616..>660 CDD:404697 15/63 (24%)
leucine-rich repeat 641..688 CDD:275380 9/46 (20%)
leucine-rich repeat 689..816 CDD:275380 16/126 (13%)
LRR <794..>920 CDD:443914 40/144 (28%)
leucine-rich repeat 817..864 CDD:275380 16/63 (25%)
leucine-rich repeat 865..888 CDD:275380 9/22 (41%)
leucine-rich repeat 889..910 CDD:275380 7/22 (32%)
TIR 1076..1211 CDD:214587 61/142 (43%)
tlr4bbNP_997978.2 LRR <56..>218 CDD:443914 51/162 (31%)
leucine-rich repeat 56..77 CDD:275380 6/19 (32%)
leucine-rich repeat 78..101 CDD:275380 8/22 (36%)
leucine-rich repeat 102..125 CDD:275380 9/22 (41%)
leucine-rich repeat 126..148 CDD:275380 6/22 (27%)
leucine-rich repeat 149..173 CDD:275380 7/23 (30%)
leucine-rich repeat 174..200 CDD:275380 7/26 (27%)
leucine-rich repeat 201..222 CDD:275380 8/20 (40%)
leucine-rich repeat 326..369 CDD:275380 8/42 (19%)
leucine-rich repeat 370..395 CDD:275380 9/51 (18%)
LRR <394..>576 CDD:443914 55/248 (22%)
leucine-rich repeat 396..419 CDD:275380 6/52 (12%)
leucine-rich repeat 420..444 CDD:275380 8/52 (15%)
leucine-rich repeat 445..467 CDD:275380 4/22 (18%)
leucine-rich repeat 468..492 CDD:275380 4/23 (17%)
leucine-rich repeat 493..516 CDD:275380 6/22 (27%)
leucine-rich repeat 517..540 CDD:275380 9/22 (41%)
leucine-rich repeat 541..565 CDD:275380 8/23 (35%)
TIR 675..816 CDD:214587 60/140 (43%)
Blue background indicates that the domain is not in the aligned region.

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