DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tollo and tlr4ba

DIOPT Version :9

Sequence 1:NP_524757.1 Gene:Tollo / 44497 FlyBaseID:FBgn0029114 Length:1346 Species:Drosophila melanogaster
Sequence 2:XP_009305503.1 Gene:tlr4ba / 403131 ZFINID:ZDB-GENE-040219-8 Length:824 Species:Danio rerio


Alignment Length:963 Identity:227/963 - (23%)
Similarity:362/963 - (37%) Gaps:277/963 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   337 LDLSANKISRLEAHIFRPLASLQILKLEDNYIDQLPGGIFADLTNLHTLILSRNRISVIEQ---R 398
            ||.|.|...:|:..||..|:.|::|.|...:|.|:....|.::.||.||.|:.|.|.....   .
Zfish    56 LDFSFNFFPQLKKTIFPVLSFLRVLDLSRCHIRQIENDAFYNVKNLTTLFLTGNPIIYFAPGCLN 120

  Fly   399 TLQGLKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKLQA--VPEALAHVQLLKTLDVGEN 461
            ||..|:.|:::.:....:    |.::.|.::||:|::..|.:|:  :|..:...:....||:..|
Zfish   121 TLYNLQRLVLVDIGLESL----QLNINNLTKLQELNVGTNYIQSMTLPPFMTTFKNFSLLDLHAN 181

  Fly   462 MISQIENTSITQLESL---YGLRMTENSLTHIRRGVFDRMSSLQILNLSQNKLKSIEAGSLQRNS 523
            .||.|.......|..:   ..|.:|.|.|.||..|.|                |.:....|...|
Zfish   182 NISIIRTNHTVVLREIGRNMTLILTWNPLLHIEPGAF----------------KDVYLRQLDIRS 230

  Fly   524 QLQAIRLDGNQLKSIAGLFTELPNLVWLNISGNRLEKFDYSHIPIGLQWLDVRANRIT------- 581
            ...:.......||::.|          ||:......|:...:   |..::|   |.:.       
Zfish   231 AFVSFSAQKAALKALHG----------LNVKRLIFGKYREDN---GFHFVD---NDVLDGLCCFN 279

  Fly   582 -QLGNYFEIES-ELSLSTFDASYNLLTEITASSIPNSVEVLYLNDNQISKIQPYTFFKKPNLTRV 644
             |..:|:.:|| :.:::.|....| .|.||            :....|.:::...|.|...|.  
Zfish   280 FQEVSYYVLESAKTTIAIFRCMIN-ATRIT------------VKGGNIYEMETVHFHKTKELY-- 329

  Fly   645 DLVRNRLTTLEPNALRLSPIAEDREIPEFYIGHNAYECDCNLDWLQKVNRESRTQP----QLMDL 705
             |:.|.|.||                |...:.|        |..|:|:.....::|    ...||
Zfish   330 -LINNGLGTL----------------PTKQLSH--------LHTLEKLEITHNSEPIFAEPFTDL 369

  Fly   706 DQIHCRLAYARGSSHVSLIEAKSDDFLCKYASHCFALCHCCDFQACDCKMECPDRCSCYHDQSWT 770
            .::          .:|.|    ||:.|        .:.|||                        
Zfish   370 PKL----------QYVDL----SDNQL--------KIKHCC------------------------ 388

  Fly   771 SNVVDCSRASYEQTLPSHIPMD-------STQLYLDGNNFRELQSHAFI---------------- 812
                        .||.|..|..       ::::.:|...|..|.|...:                
Zfish   389 ------------STLLSGTPQINYLNLSLNSEISVDVGGFEGLDSLEILDFSYTRVVRIGYLSVL 441

  Fly   813 -GRKRLKVLHLNHSRIEVLHNRTFYGLLELEVLQLQSN-------------------------QL 851
             ..|.|:.|.:::|.:...:...|.||..|.||::..|                         .|
Zfish   442 SNLKNLRYLDVSYSSVTFSNIFCFLGLSSLNVLKMAGNNFQGNVAKYVFNNLTLLEHLDMSFCHL 506

  Fly   852 KALNGNEFQGLDNLQELYLQHNAIATIDTLTFTHLYHLKILRLDHNAITSFA--VWNFLPSYLNE 914
            ..|:.:.|:.|..|:.|.::.|.:..||.||..:|..|....::.|:||:..  |...||..|:|
Zfish   507 VELHTSSFKYLQRLRHLNVKGNYLIKIDFLTHPNLKQLTSFYVEKNSITAIPLHVLKNLPMNLSE 571

  Fly   915 LRLASNPWTCSCEFIDKLRDYINRHEYVVDKLKMKCDVISGNSTQQMVIYPGSGEPASLPVVQCS 979
            ..|:.||..|||...|.:...||..:.:.....:.|..||.||..::         ....:..|.
Zfish   572 FDLSFNPIDCSCSQTDFMLWIINNQKVLKQPENILCKTISPNSDFRV---------TDFDIDHCV 627

  Fly   980 QTLPLGLDNNFNYAEQAGGENASNATSTKMILNQPPKLDYIPILVAILTAF--IFVMICISLVFI 1042
                                                   |...|:.:|..|  :|:::...||:.
Zfish   628 ---------------------------------------YKKKLIIVLPVFCVVFIVVLSILVYR 653

  Fly  1043 FRQEMR-VWCHSRFGVRLFYNAQKDVDKNEREKLFDAFVSYSSKDELFVNEELAPMLEMGEHRYK 1106
            |:..:| .|...| |.|         ...::|..:||||.:||.||.:|..||...||.|....:
Zfish   654 FQFYLRYCWILLR-GYR---------SPGQQECSYDAFVIFSSYDEAWVMNELMENLENGVPPIQ 708

  Fly  1107 LCLHQRDFPVGGYLPETIV-QAIDSSRRTIMVVSENFIKSEWCRFEFKSAHQSVLRDRRRRLIVI 1170
            ||||.|||..|..:...|: :.|..||:.|:|||::||.|.||||||:.|....|.:|...:|:|
Zfish   709 LCLHMRDFQAGKSIASNIIDEGIMGSRKIIVVVSQHFIDSAWCRFEFELAQSRFLMERNANIIII 773

  Fly  1171 VLGEVPQKELDPDLRL--YLKTNTYLQWG-DKL----FWQKLRFALPDVSSSQ 1216
            :|.:|.:::....|.|  :||.||||:|. |.|    ||.:||.|:  |::.|
Zfish   774 ILEDVAERKTKKILGLHKHLKKNTYLKWSRDPLSNMRFWIRLRKAI--VATKQ 824

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TolloNP_524757.1 LRR_RI <85..281 CDD:238064
leucine-rich repeat 100..123 CDD:275380
leucine-rich repeat 124..144 CDD:275380
LRR_8 152..222 CDD:290566
leucine-rich repeat 154..177 CDD:275380
leucine-rich repeat 178..201 CDD:275380
LRR 210..656 CDD:227223 78/335 (23%)
leucine-rich repeat 212..235 CDD:275380
leucine-rich repeat 236..259 CDD:275380
leucine-rich repeat 260..283 CDD:275380
LRR_RI 276..558 CDD:238064 56/228 (25%)
leucine-rich repeat 284..307 CDD:275380
leucine-rich repeat 308..333 CDD:275380
leucine-rich repeat 334..357 CDD:275380 8/19 (42%)
leucine-rich repeat 358..381 CDD:275380 6/22 (27%)
leucine-rich repeat 382..405 CDD:275380 9/25 (36%)
leucine-rich repeat 406..429 CDD:275380 3/22 (14%)
leucine-rich repeat 430..452 CDD:275380 6/23 (26%)
leucine-rich repeat 453..500 CDD:275380 15/49 (31%)
leucine-rich repeat 501..521 CDD:275380 2/19 (11%)
leucine-rich repeat 525..547 CDD:275380 3/21 (14%)
leucine-rich repeat 548..573 CDD:275380 4/24 (17%)
leucine-rich repeat 604..640 CDD:275380 6/35 (17%)
leucine-rich repeat 641..688 CDD:275380 9/46 (20%)
leucine-rich repeat 689..816 CDD:275380 21/154 (14%)
LRR_8 815..875 CDD:290566 18/84 (21%)
leucine-rich repeat 817..864 CDD:275380 14/71 (20%)
LRR_8 864..921 CDD:290566 18/58 (31%)
leucine-rich repeat 865..888 CDD:275380 8/22 (36%)
leucine-rich repeat 889..910 CDD:275380 6/22 (27%)
TIR 1076..1211 CDD:214587 62/142 (44%)
tlr4baXP_009305503.1 leucine-rich repeat 54..76 CDD:275380 8/19 (42%)
LRR_8 77..132 CDD:290566 17/54 (31%)
leucine-rich repeat 77..100 CDD:275380 6/22 (27%)
leucine-rich repeat 101..124 CDD:275380 8/22 (36%)
leucine-rich repeat 125..147 CDD:275380 4/25 (16%)
leucine-rich repeat 148..173 CDD:275380 6/24 (25%)
leucine-rich repeat 175..201 CDD:275380 7/25 (28%)
leucine-rich repeat 325..348 CDD:275380 9/49 (18%)
LRR_RI <326..458 CDD:238064 34/216 (16%)
LRR_8 326..382 CDD:290566 18/96 (19%)
leucine-rich repeat 349..371 CDD:275380 5/21 (24%)
leucine-rich repeat 372..421 CDD:275380 15/106 (14%)
LRR_8 396..454 CDD:290566 8/57 (14%)
leucine-rich repeat 422..446 CDD:275380 0/23 (0%)
LRR_8 445..506 CDD:290566 11/60 (18%)
leucine-rich repeat 447..470 CDD:275380 6/22 (27%)
leucine-rich repeat 471..495 CDD:275380 4/23 (17%)
LRR_8 496..579 CDD:290566 23/82 (28%)
leucine-rich repeat 496..519 CDD:275380 4/22 (18%)
leucine-rich repeat 520..543 CDD:275380 8/22 (36%)
leucine-rich repeat 544..568 CDD:275380 7/23 (30%)
TIR 678..819 CDD:214587 61/140 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 96 1.000 Domainoid score I7248
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm24216
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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