DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tollo and Tlr12

DIOPT Version :9

Sequence 1:NP_524757.1 Gene:Tollo / 44497 FlyBaseID:FBgn0029114 Length:1346 Species:Drosophila melanogaster
Sequence 2:NP_001102152.1 Gene:Tlr12 / 362604 RGDID:1559145 Length:904 Species:Rattus norvegicus


Alignment Length:1218 Identity:270/1218 - (22%)
Similarity:428/1218 - (35%) Gaps:413/1218 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VCHLRTIN--------SELENTNFSVIQPQNTVRLRLECNDALFFQSSLSPDSFRSLVELRDLTI 105
            :||...::        |.|..|..:|  |:|...|.|..:     .|:|.||:|.:...|:.|.:
  Rat    42 LCHYSKLSFLAACFPVSNLTQTLEAV--PRNVEGLCLSGS-----VSTLLPDAFSAFPGLKFLGL 99

  Fly   106 EYCKLGNLTDGSFRGLQELRNLTIRTHNGDWSTMSLEMASNSFVEFRQLERLDLSLNNIWLIPDG 170
            . ..|..|..|:.|||.:||||                   |||:      .....|:::|.||.
  Rat   100 N-LHLTRLLPGALRGLGQLRNL-------------------SFVD------QPSGKNSLFLPPDA 138

  Fly   171 MVCPLKSLQHLNASYNKIQDISNFYFSASLSSRKARV-CGSTLQSLDLSANKMVSLPTAMLSALG 234
            . ..|.|||.|             :|.....::||.| ..|:||.|        |:..:.|...|
  Rat   139 F-GDLISLQRL-------------HFCGPCLNKKAGVRLPSSLQWL--------SVTISCLQDSG 181

  Fly   235 RLTHL--NMAKNSMSFLADRAFEGLLSLRVVDLSANRLTSLPPELFAETKQLQEIYLRNNSINVL 297
            .|..:  ::.:||.|       ....:|:.:|||.|:                       .:.:.
  Rat   182 ELAGIFPDLVQNSSS-------RASWTLKKLDLSLNQ-----------------------KLKMA 216

  Fly   298 APGIFGELAELLVLDLASNELNSQWINAATFVGLKRLMMLDLSANKISRLEAHIFRPLASLQILK 362
            .||....| ::.:|||...:|::   .|...:||::|.:|              :.|.|:.::  
  Rat   217 TPGSLQGL-QVEILDLRKTQLDA---GAVKGLGLQKLNVL--------------YAPTATAEL-- 261

  Fly   363 LEDNYIDQLPGGIFADLTNLHTLILSRNRISVIEQRTLQGLKNLLVLSLDFNRISRMDQRSLVNC 427
                          |..|..|.              .|||      |::|.::|..:.|.:|.:|
  Rat   262 --------------AAETAAHF--------------ELQG------LNVDRSKIGNISQEALASC 292

  Fly   428 SQLQDLHLNDNKLQAVPEA-LAHVQLLKTLDVGENMISQIENTSITQLES-----LYGLRMTENS 486
            ..|:.|.|:|..|..:|.. ||.:..|:.|::..|   |:::|.:...|:     |..|.::.|.
  Rat   293 HSLETLSLSDTGLTKLPPGFLAAMPRLRRLNLAGN---QLQSTMLCMNETGDVSGLSTLDLSGNG 354

  Fly   487 LTHIRRGVFDRMSSLQILNLSQNKLKSIEAGSLQRNSQLQAIRLDGNQLKSIA-GLFTELPNLVW 550
            |..:....|..:..|:.|.|..|:|.|:|....|...||:.::||.|.|.::. .....||.|..
  Rat   355 LRILPPATFSCLPHLRELLLQDNQLLSLEGHPFQDLQQLETLKLDRNPLLNLGKNCLAALPALTT 419

  Fly   551 LNISGNRLEKFDYSHIPIGLQWLDVRANRITQLGNYFEIESELSLSTFDASYNLLTEITASSIPN 615
            |::...::     .|.|....|                  ...||.|...|...|:.....|:| 
  Rat   420 LSLLDTQI-----LHSPDAGFW------------------GARSLHTLHLSLPPLSAPAVLSLP- 460

  Fly   616 SVEVLYLNDNQISKIQPYTFFKKPNLTRVDLVRNRLTTLEPNALRLSPIAEDREIPEFYIGHNAY 680
                :||...::        ...|.|        :..||.||   :.|..|...|          
  Rat   461 ----MYLTSLEL--------HVTPGL--------KHWTLSPN---IFPFLETLTI---------- 492

  Fly   681 ECDCNLDWLQ-KVNRESRTQPQLMDLDQIHCRLAYARGSSHVSLIEAKSDDFLCKYASHCFALCH 744
                |...|: .|...|...|.|                .|:.|::...|.|..:.||..|.   
  Rat   493 ----NGRGLKLGVQNASEVFPAL----------------QHLFLLQNSLDAFCSQDASSIFL--- 534

  Fly   745 CCDFQACDCKMECPDRCSCYHDQSWTSNVVDCSRASYEQTLPSHIPMDSTQLYLDGNNFRELQSH 809
                                    |              .||.   :.|.:::..|:|.|.....
  Rat   535 ------------------------W--------------QLPK---LQSLKVWGAGSNSRPCLIT 558

  Fly   810 AFIGRKRLKVLHLNHSRIEVLHNRTFYGLLELEVLQLQSNQLKALNGNEFQGLDNLQELYLQHNA 874
            .....:.||:..|.                  .:.|.:|.||:.|.|:    |..||.|.|....
  Rat   559 GLPSLQELKLESLQ------------------SITQPRSVQLEELVGD----LPQLQALQLSSTG 601

  Fly   875 IATIDTLTFTHLYHLKILRLDHNAITSFAVWNFLPSYLNELRLASNPWTCSCEFIDKLRDY---I 936
            :.::....|..|:.|:.|.||..               .:|.|.           |.||:|   :
  Rat   602 LKSLSAAAFRRLHSLQALVLDSE---------------KDLVLQ-----------DSLREYSPQM 640

  Fly   937 NRHEYVV-DKLKMKC-----DVISGNSTQQMV------IYPGSGE-PASLPVV-----QCSQTLP 983
            .|:.|:: .||..:|     ::....||:..|      :.||... ||...::     .|.|||.
  Rat   641 PRYVYILQSKLACQCANAWMELWVKQSTKTYVHIRDGHLCPGEVRVPARDSLISFLWDHCPQTLE 705

  Fly   984 LGLDNNFNYAEQAGGENASNATSTKMI---LNQPPKLDYIPILVAILTAFIFVMICISLVFIFRQ 1045
            |.|            ..||:|....:|   |.|..:..:||.|.|:                   
  Rat   706 LKL------------FLASSALVLLLIVLPLLQGARNTWIPYLRAL------------------- 739

  Fly  1046 EMRVWCHSRFGVRLFYNAQKDVDKNEREKLFDAFVSYSSKDELFVNEELAPMLE------MGEHR 1104
             .|:|..   |:|...||.|       ..|||.|||:..:|:.:|.|||.|.||      :|   
  Rat   740 -FRIWLQ---GLRGQGNAGK-------RFLFDVFVSHCRQDQGWVLEELLPALEGFLPAGLG--- 790

  Fly  1105 YKLCLHQRDFPVGGYLPETIVQAIDSSRRTIMVVSENFIKSEWCRFEFKSAHQSVLRDRRRRLIV 1169
            .:|||.:|||..|..:.:.:|.::.|||.|:.|:|...:.:..|..|.:.|...:|......:::
  Rat   791 LRLCLPERDFEPGKDVVDNVVDSMVSSRVTLCVLSGPALCNPRCCLELRLATSLLLAAPSPPVLL 855

  Fly  1170 IV-LGEVPQKELDPDLRL--YLKTNTYLQWGDKL-----FWQKLRFAL 1209
            :| |..:.:.:|....||  .|:...|..|.::.     ||..||..|
  Rat   856 LVFLEPISRHQLPSYHRLARLLRRGDYCLWPEEEERKGGFWTWLRSRL 903

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TolloNP_524757.1 LRR_RI <85..281 CDD:238064 49/198 (25%)
leucine-rich repeat 100..123 CDD:275380 8/22 (36%)
leucine-rich repeat 124..144 CDD:275380 4/19 (21%)
LRR_8 152..222 CDD:290566 17/70 (24%)
leucine-rich repeat 154..177 CDD:275380 5/22 (23%)
leucine-rich repeat 178..201 CDD:275380 4/22 (18%)
LRR 210..656 CDD:227223 95/454 (21%)
leucine-rich repeat 212..235 CDD:275380 5/22 (23%)
leucine-rich repeat 236..259 CDD:275380 4/24 (17%)
leucine-rich repeat 260..283 CDD:275380 5/22 (23%)
LRR_RI 276..558 CDD:238064 63/288 (22%)
leucine-rich repeat 284..307 CDD:275380 3/22 (14%)
leucine-rich repeat 308..333 CDD:275380 7/24 (29%)
leucine-rich repeat 334..357 CDD:275380 3/22 (14%)
leucine-rich repeat 358..381 CDD:275380 1/22 (5%)
leucine-rich repeat 382..405 CDD:275380 4/22 (18%)
leucine-rich repeat 406..429 CDD:275380 6/22 (27%)
leucine-rich repeat 430..452 CDD:275380 8/22 (36%)
leucine-rich repeat 453..500 CDD:275380 11/51 (22%)
leucine-rich repeat 501..521 CDD:275380 7/19 (37%)
leucine-rich repeat 525..547 CDD:275380 6/22 (27%)
leucine-rich repeat 548..573 CDD:275380 4/24 (17%)
leucine-rich repeat 604..640 CDD:275380 5/35 (14%)
leucine-rich repeat 641..688 CDD:275380 9/46 (20%)
leucine-rich repeat 689..816 CDD:275380 19/127 (15%)
LRR_8 815..875 CDD:290566 14/59 (24%)
leucine-rich repeat 817..864 CDD:275380 10/46 (22%)
LRR_8 864..921 CDD:290566 12/56 (21%)
leucine-rich repeat 865..888 CDD:275380 6/22 (27%)
leucine-rich repeat 889..910 CDD:275380 4/20 (20%)
TIR 1076..1211 CDD:214587 45/148 (30%)
Tlr12NP_001102152.1 leucine-rich repeat 71..93 CDD:275380 7/26 (27%)
leucine-rich repeat 94..116 CDD:275380 8/22 (36%)
leucine-rich repeat 117..144 CDD:275380 12/52 (23%)
leucine-rich repeat 202..225 CDD:275380 8/46 (17%)
leucine-rich repeat 226..270 CDD:275380 14/90 (16%)
leucine-rich repeat 246..259 CDD:275381 5/26 (19%)
LRR_8 270..329 CDD:290566 20/67 (30%)
leucine-rich repeat 271..294 CDD:275380 9/28 (32%)
LRR_4 294..331 CDD:289563 12/39 (31%)
leucine-rich repeat 295..318 CDD:275380 8/22 (36%)
leucine-rich repeat 319..344 CDD:275380 6/27 (22%)
LRR_8 343..403 CDD:290566 18/59 (31%)
LRR_RI 345..547 CDD:238064 61/322 (19%)
leucine-rich repeat 345..368 CDD:275380 5/22 (23%)
leucine-rich repeat 369..392 CDD:275380 8/22 (36%)
leucine-rich repeat 393..416 CDD:275380 6/22 (27%)
leucine-rich repeat 417..437 CDD:275380 5/42 (12%)
leucine-rich repeat 441..510 CDD:275380 21/106 (20%)
leucine-rich repeat 511..562 CDD:275380 15/110 (14%)
leucine-rich repeat 563..591 CDD:275380 10/49 (20%)
leucine-rich repeat 592..615 CDD:275380 6/22 (27%)
TIR 759..900 CDD:214587 42/143 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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