DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tollo and Cd180

DIOPT Version :10

Sequence 1:NP_524757.1 Gene:Tollo / 44497 FlyBaseID:FBgn0029114 Length:1346 Species:Drosophila melanogaster
Sequence 2:NP_001099875.1 Gene:Cd180 / 294706 RGDID:1308170 Length:662 Species:Rattus norvegicus


Alignment Length:679 Identity:154/679 - (22%)
Similarity:242/679 - (35%) Gaps:218/679 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 SLQILKLEDNYIDQLPGGIFADLTNLHTLILSRNRISVIEQRTLQGLKNLLVLSLDFNRISRMDQ 421
            |.:.|:...|.:..:....|:.|.||..|.|:|.:|..|.:.|.|....|..|.|..|.:..|.:
  Rat    54 STESLEFSFNALPTIQKTTFSRLVNLTFLDLTRCQIYWIHEDTFQSQHRLETLVLTANPLIFMAE 118

  Fly   422 RSLVNCSQLQDLHLNDNKLQAVPEALAHVQ-LLKTLDVGENMISQIENTSITQLESLYGLRMTEN 485
            .:|.....|:.|......:.::.....|.| .|::|.:|.|.||.|........|.|..|....|
  Rat   119 TALTGPKALKHLFFIQTGISSIEFIPVHSQKALESLYLGSNHISSIRLPKDFPTEKLKVLDFQNN 183

  Fly   486 SLTHIRRGVFDRMSSLQ-----ILNLSQNKLKSIEAGSLQRNSQLQAIRLDGNQLKSIAGLFTEL 545
            ::.|:.:   :.:||||     .|||:.|.:..||.|:. :::..|::...|.|  |:..:|..|
  Rat   184 AIHHLSK---EDVSSLQQATNLSLNLNGNDITGIEPGAF-KSTVFQSLNFGGTQ--SLLVIFKGL 242

  Fly   546 PN----LVWL----------NISGN-------------RLEKFDYSHIP-------IGLQWLDVR 576
            .|    .:||          :||.:             .|:|..:.:|.       .|||.||:.
  Rat   243 QNSTIQSLWLGTFEDIDDDEDISSSMFEGLCEMSVERINLQKHHFFNITSNTFYCFSGLQELDLT 307

  Fly   577 ANRITQLGNYFEIESELSLSTFDAS-YNLLTEITASSIPNSVEVLYLNDNQISKIQPYTFFKKPN 640
            |..:|:|.:.....|:|......|: :..|.:|:||:.| |:..||:               |.|
  Rat   308 ATHLTELPSGIVGLSKLKKLVLSANKFENLCQISASNFP-SLTHLYI---------------KGN 356

  Fly   641 LTRVDLVRNRLTTLEPNALRLSPIAEDREIPEFYIGHNAYE-CDC------NLDWLQKVNRE--- 695
            ..|::|....|.|||             .:.|..:.|:..| .||      ||..||.:|..   
  Rat   357 TKRLELGSGCLETLE-------------HLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNE 408

  Fly   696 ---SRTQ-----PQLMDLDQIHCRLAYARGSSHVSLIEAKSDDFLCKYASHCFALCHCCDFQACD 752
               .||:     |||..||     ||:.|                          .|..|.|:  
  Rat   409 PLGLRTEAFKECPQLELLD-----LAFTR--------------------------LHVKDAQS-- 440

  Fly   753 CKMECPDRCSCYHDQSWTSNVVDCSRASYEQTLPSHIPMDSTQLYLDGNNFRELQSHAFIGRKRL 817
                                                 |..:..|                    |
  Rat   441 -------------------------------------PFQNLHL--------------------L 448

  Fly   818 KVLHLNHSRIEVLHNRTFYGLLELEVLQLQSNQLKALNG-----NEFQGLDNLQELYLQHNAIAT 877
            |||:|:|..:...:.....||..|..|.||.|:..  ||     |..|.|.:|:.|.|....:::
  Rat   449 KVLNLSHCLLGSSNQHLLDGLPALRHLNLQGNRFP--NGNIQKTNPLQALGSLEILILSFCDLSS 511

  Fly   878 IDTLTFTHLYHLKILRLDHNAITSFAVW----------------------NFLP--SYLNELRLA 918
            ||...|.:|..:..:.|.||.:||.::.                      :.||  |....:.|.
  Rat   512 IDHQAFINLKIMNHVDLSHNRLTSSSIEALSHLKGIYLNLASNRISIIPPSLLPVLSQQRTINLR 576

  Fly   919 SNPWTCSCE---FIDKLRDYINRHEYVVD 944
            .||..|:|.   |::..::.:.:.|.:.|
  Rat   577 QNPLDCTCSNIYFLEWYKENMQKLEDIED 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TolloNP_524757.1 LRR 54..400 CDD:443914 12/42 (29%)
leucine-rich repeat 100..123 CDD:275380
leucine-rich repeat 124..144 CDD:275380
leucine-rich repeat 154..177 CDD:275380
leucine-rich repeat 178..201 CDD:275380
leucine-rich repeat 212..235 CDD:275380
leucine-rich repeat 236..259 CDD:275380
LRR 239..634 CDD:443914 80/317 (25%)
leucine-rich repeat 260..283 CDD:275380
leucine-rich repeat 284..307 CDD:275380
leucine-rich repeat 308..333 CDD:275380
leucine-rich repeat 334..357 CDD:275380 154/679 (23%)
leucine-rich repeat 358..381 CDD:275380 4/22 (18%)
leucine-rich repeat 382..405 CDD:275380 8/22 (36%)
leucine-rich repeat 406..429 CDD:275380 6/22 (27%)
leucine-rich repeat 430..452 CDD:275380 4/22 (18%)
leucine-rich repeat 453..500 CDD:275380 12/46 (26%)
leucine-rich repeat 501..521 CDD:275380 9/24 (38%)
leucine-rich repeat 525..547 CDD:275380 6/21 (29%)
leucine-rich repeat 548..573 CDD:275380 10/54 (19%)
leucine-rich repeat 604..640 CDD:275380 9/35 (26%)
LRR_8 616..>660 CDD:404697 11/43 (26%)
leucine-rich repeat 641..688 CDD:275380 13/53 (25%)
leucine-rich repeat 689..816 CDD:275380 18/137 (13%)
LRR <794..>920 CDD:443914 35/154 (23%)
leucine-rich repeat 817..864 CDD:275380 18/51 (35%)
leucine-rich repeat 865..888 CDD:275380 7/22 (32%)
leucine-rich repeat 889..910 CDD:275380 7/44 (16%)
TIR 1076..1211 CDD:214587
Cd180NP_001099875.1 PRK15370 <44..>209 CDD:185268 43/157 (27%)
leucine-rich repeat 55..78 CDD:275380 4/22 (18%)
leucine-rich repeat 79..102 CDD:275380 8/22 (36%)
leucine-rich repeat 103..126 CDD:275380 6/22 (27%)
leucine-rich repeat 127..150 CDD:275380 4/22 (18%)
leucine-rich repeat 151..174 CDD:275380 7/22 (32%)
leucine-rich repeat 175..195 CDD:275380 4/22 (18%)
LRR 194..560 CDD:443914 107/489 (22%)
leucine-rich repeat 196..223 CDD:275380 9/27 (33%)
leucine-rich repeat 224..244 CDD:275380 6/21 (29%)
leucine-rich repeat 277..300 CDD:275380 3/22 (14%)
leucine-rich repeat 301..323 CDD:275380 7/21 (33%)
leucine-rich repeat 324..347 CDD:275380 7/23 (30%)
leucine-rich repeat 348..372 CDD:275380 10/51 (20%)
leucine-rich repeat 373..398 CDD:275380 7/24 (29%)
leucine-rich repeat 399..422 CDD:275380 5/22 (23%)
leucine-rich repeat 423..447 CDD:275380 10/93 (11%)
leucine-rich repeat 448..471 CDD:275380 8/22 (36%)
leucine-rich repeat 472..498 CDD:275380 10/27 (37%)
leucine-rich repeat 499..522 CDD:275380 7/22 (32%)
leucine-rich repeat 523..546 CDD:275380 5/22 (23%)
PCC 550..>616 CDD:188093 11/56 (20%)
Blue background indicates that the domain is not in the aligned region.

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