DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tollo and Cd180

DIOPT Version :9

Sequence 1:NP_524757.1 Gene:Tollo / 44497 FlyBaseID:FBgn0029114 Length:1346 Species:Drosophila melanogaster
Sequence 2:NP_001099875.1 Gene:Cd180 / 294706 RGDID:1308170 Length:662 Species:Rattus norvegicus


Alignment Length:679 Identity:154/679 - (22%)
Similarity:242/679 - (35%) Gaps:218/679 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 SLQILKLEDNYIDQLPGGIFADLTNLHTLILSRNRISVIEQRTLQGLKNLLVLSLDFNRISRMDQ 421
            |.:.|:...|.:..:....|:.|.||..|.|:|.:|..|.:.|.|....|..|.|..|.:..|.:
  Rat    54 STESLEFSFNALPTIQKTTFSRLVNLTFLDLTRCQIYWIHEDTFQSQHRLETLVLTANPLIFMAE 118

  Fly   422 RSLVNCSQLQDLHLNDNKLQAVPEALAHVQ-LLKTLDVGENMISQIENTSITQLESLYGLRMTEN 485
            .:|.....|:.|......:.::.....|.| .|::|.:|.|.||.|........|.|..|....|
  Rat   119 TALTGPKALKHLFFIQTGISSIEFIPVHSQKALESLYLGSNHISSIRLPKDFPTEKLKVLDFQNN 183

  Fly   486 SLTHIRRGVFDRMSSLQ-----ILNLSQNKLKSIEAGSLQRNSQLQAIRLDGNQLKSIAGLFTEL 545
            ::.|:.:   :.:||||     .|||:.|.:..||.|:. :::..|::...|.|  |:..:|..|
  Rat   184 AIHHLSK---EDVSSLQQATNLSLNLNGNDITGIEPGAF-KSTVFQSLNFGGTQ--SLLVIFKGL 242

  Fly   546 PN----LVWL----------NISGN-------------RLEKFDYSHIP-------IGLQWLDVR 576
            .|    .:||          :||.:             .|:|..:.:|.       .|||.||:.
  Rat   243 QNSTIQSLWLGTFEDIDDDEDISSSMFEGLCEMSVERINLQKHHFFNITSNTFYCFSGLQELDLT 307

  Fly   577 ANRITQLGNYFEIESELSLSTFDAS-YNLLTEITASSIPNSVEVLYLNDNQISKIQPYTFFKKPN 640
            |..:|:|.:.....|:|......|: :..|.:|:||:.| |:..||:               |.|
  Rat   308 ATHLTELPSGIVGLSKLKKLVLSANKFENLCQISASNFP-SLTHLYI---------------KGN 356

  Fly   641 LTRVDLVRNRLTTLEPNALRLSPIAEDREIPEFYIGHNAYE-CDC------NLDWLQKVNRE--- 695
            ..|::|....|.|||             .:.|..:.|:..| .||      ||..||.:|..   
  Rat   357 TKRLELGSGCLETLE-------------HLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNE 408

  Fly   696 ---SRTQ-----PQLMDLDQIHCRLAYARGSSHVSLIEAKSDDFLCKYASHCFALCHCCDFQACD 752
               .||:     |||..||     ||:.|                          .|..|.|:  
  Rat   409 PLGLRTEAFKECPQLELLD-----LAFTR--------------------------LHVKDAQS-- 440

  Fly   753 CKMECPDRCSCYHDQSWTSNVVDCSRASYEQTLPSHIPMDSTQLYLDGNNFRELQSHAFIGRKRL 817
                                                 |..:..|                    |
  Rat   441 -------------------------------------PFQNLHL--------------------L 448

  Fly   818 KVLHLNHSRIEVLHNRTFYGLLELEVLQLQSNQLKALNG-----NEFQGLDNLQELYLQHNAIAT 877
            |||:|:|..:...:.....||..|..|.||.|:..  ||     |..|.|.:|:.|.|....:::
  Rat   449 KVLNLSHCLLGSSNQHLLDGLPALRHLNLQGNRFP--NGNIQKTNPLQALGSLEILILSFCDLSS 511

  Fly   878 IDTLTFTHLYHLKILRLDHNAITSFAVW----------------------NFLP--SYLNELRLA 918
            ||...|.:|..:..:.|.||.:||.::.                      :.||  |....:.|.
  Rat   512 IDHQAFINLKIMNHVDLSHNRLTSSSIEALSHLKGIYLNLASNRISIIPPSLLPVLSQQRTINLR 576

  Fly   919 SNPWTCSCE---FIDKLRDYINRHEYVVD 944
            .||..|:|.   |::..::.:.:.|.:.|
  Rat   577 QNPLDCTCSNIYFLEWYKENMQKLEDIED 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TolloNP_524757.1 LRR_RI <85..281 CDD:238064
leucine-rich repeat 100..123 CDD:275380
leucine-rich repeat 124..144 CDD:275380
LRR_8 152..222 CDD:290566
leucine-rich repeat 154..177 CDD:275380
leucine-rich repeat 178..201 CDD:275380
LRR 210..656 CDD:227223 87/339 (26%)
leucine-rich repeat 212..235 CDD:275380
leucine-rich repeat 236..259 CDD:275380
leucine-rich repeat 260..283 CDD:275380
LRR_RI 276..558 CDD:238064 58/233 (25%)
leucine-rich repeat 284..307 CDD:275380
leucine-rich repeat 308..333 CDD:275380
leucine-rich repeat 334..357 CDD:275380 154/679 (23%)
leucine-rich repeat 358..381 CDD:275380 4/22 (18%)
leucine-rich repeat 382..405 CDD:275380 8/22 (36%)
leucine-rich repeat 406..429 CDD:275380 6/22 (27%)
leucine-rich repeat 430..452 CDD:275380 4/22 (18%)
leucine-rich repeat 453..500 CDD:275380 12/46 (26%)
leucine-rich repeat 501..521 CDD:275380 9/24 (38%)
leucine-rich repeat 525..547 CDD:275380 6/21 (29%)
leucine-rich repeat 548..573 CDD:275380 10/54 (19%)
leucine-rich repeat 604..640 CDD:275380 9/35 (26%)
leucine-rich repeat 641..688 CDD:275380 13/53 (25%)
leucine-rich repeat 689..816 CDD:275380 18/137 (13%)
LRR_8 815..875 CDD:290566 21/64 (33%)
leucine-rich repeat 817..864 CDD:275380 18/51 (35%)
LRR_8 864..921 CDD:290566 16/80 (20%)
leucine-rich repeat 865..888 CDD:275380 7/22 (32%)
leucine-rich repeat 889..910 CDD:275380 7/44 (16%)
TIR 1076..1211 CDD:214587
Cd180NP_001099875.1 leucine-rich repeat 55..78 CDD:275380 4/22 (18%)
leucine-rich repeat 79..102 CDD:275380 8/22 (36%)
leucine-rich repeat 103..126 CDD:275380 6/22 (27%)
leucine-rich repeat 127..150 CDD:275380 4/22 (18%)
leucine-rich repeat 151..174 CDD:275380 7/22 (32%)
leucine-rich repeat 175..195 CDD:275380 4/22 (18%)
leucine-rich repeat 196..223 CDD:275380 9/27 (33%)
leucine-rich repeat 224..244 CDD:275380 6/21 (29%)
leucine-rich repeat 277..300 CDD:275380 3/22 (14%)
LRR_RI 301..480 CDD:238064 63/297 (21%)
leucine-rich repeat 301..323 CDD:275380 7/21 (33%)
LRR_8 322..383 CDD:290566 21/89 (24%)
leucine-rich repeat 324..347 CDD:275380 7/23 (30%)
leucine-rich repeat 348..372 CDD:275380 10/51 (20%)
LRR_8 372..433 CDD:290566 20/91 (22%)
leucine-rich repeat 373..398 CDD:275380 7/24 (29%)
leucine-rich repeat 399..422 CDD:275380 5/22 (23%)
LRR_8 421..482 CDD:290566 26/150 (17%)
leucine-rich repeat 423..447 CDD:275380 10/93 (11%)
leucine-rich repeat 448..471 CDD:275380 8/22 (36%)
leucine-rich repeat 472..498 CDD:275380 10/27 (37%)
LRR_8 498..556 CDD:290566 12/57 (21%)
leucine-rich repeat 499..522 CDD:275380 7/22 (32%)
leucine-rich repeat 523..546 CDD:275380 5/22 (23%)
TPKR_C2 578..627 CDD:301599 7/28 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D147327at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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