DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tollo and sym-1

DIOPT Version :10

Sequence 1:NP_524757.1 Gene:Tollo / 44497 FlyBaseID:FBgn0029114 Length:1346 Species:Drosophila melanogaster
Sequence 2:NP_510426.1 Gene:sym-1 / 181555 WormBaseID:WBGene00006366 Length:680 Species:Caenorhabditis elegans


Alignment Length:441 Identity:113/441 - (25%)
Similarity:201/441 - (45%) Gaps:49/441 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 IRTHNGDWSTMSLEMASNSFVEFRQLERLDLSLNNIWLIPDGMVCPLKSL--QHLNASYNKIQDI 191
            |:....|...|..::::.:.:|.|     :|:|.|..:|..|... .|:|  :.|..|.|:|:.|
 Worm    40 IKCSGHDGLRMVEKLSTTTTMEVR-----ELALENADIIEVGPKA-FKTLRIKKLILSNNRIEKI 98

  Fly   192 SNFYFSASLSSRKARVCGSTLQSLDLSANKMVSLPTAMLSALGRLTHLNMAKNSMSFLADRAFEG 256
            .:..|:.         ..:.:|.|.||.|.:..:||:.|:.|..|..|::..|.:..:..:||..
 Worm    99 HDHAFTG---------LENVMQELSLSENNLKEVPTSALAGLRVLNILSLKCNKIENITTKAFVN 154

  Fly   257 LLSLRVVDLSANRLTSLPPELFAETK-QLQEIYLRNNSINVLAPGIFGELAELLVLDLASNELNS 320
            :.||..|:|..|::.|:..:.||..| .||.:.|.||.:                     .|..|
 Worm   155 MTSLIDVNLGCNQICSMAADTFANVKMSLQNLILDNNCM---------------------TEFPS 198

  Fly   321 QWINAATFVGLKRLMMLDLSANKISRLEAHIFRPLASLQILKLEDNYIDQLPGGIFADLTNLHTL 385
            :.:.     .:..|:.|.:..|||:.:..:.|..|.||.:|.|..|.|.::.||...:..|||.|
 Worm   199 KAVR-----NMNNLIALHIKYNKINAIRQNDFVNLTSLSMLSLNGNNISEIKGGALQNTPNLHYL 258

  Fly   386 ILSRNRISVIEQRTLQGLKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKLQAV-PEALAH 449
            .|:.|.:..::...|:..|.|.||.|.||..:.:.:........:|.|:|:.|::.|| |.|.|.
 Worm   259 YLNENNLQTLDNGVLEQFKQLQVLDLSFNNFTDITKEMFEGLESIQHLNLDSNRISAVAPGAFAG 323

  Fly   450 VQLLKTLDVGENMISQIENTSITQLESLYGLRMTENSLTHIRRGVFDRMSSLQILNLSQNKLKSI 514
            ..|| .|.:..|.::::...::.....|..:.::.|::..:....||.:.:|..|:|:.||:.|:
 Worm   324 TPLL-LLWLPNNCLTEVSQQTLKGAPFLRMVSLSNNNIREVHELSFDHLPNLHTLDLANNKIMSL 387

  Fly   515 EAGSLQRNSQLQAIRLDGNQLKSIAGLFTELPN--LVWLNISGNRLEKFDY 563
            :..||.....| |:||..|.:..:...|..|.:  .:||....|.:.|.::
 Worm   388 QNKSLSGPENL-AVRLQENPVVCVKNGFHVLNSGEAIWLTNEANTICKGEW 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TolloNP_524757.1 LRR 54..400 CDD:443914 69/273 (25%)
leucine-rich repeat 100..123 CDD:275380
leucine-rich repeat 124..144 CDD:275380 3/14 (21%)
leucine-rich repeat 154..177 CDD:275380 5/22 (23%)
leucine-rich repeat 178..201 CDD:275380 7/24 (29%)
leucine-rich repeat 212..235 CDD:275380 9/22 (41%)
leucine-rich repeat 236..259 CDD:275380 5/22 (23%)
LRR 239..634 CDD:443914 85/329 (26%)
leucine-rich repeat 260..283 CDD:275380 8/23 (35%)
leucine-rich repeat 284..307 CDD:275380 5/22 (23%)
leucine-rich repeat 308..333 CDD:275380 2/24 (8%)
leucine-rich repeat 334..357 CDD:275380 7/22 (32%)
leucine-rich repeat 358..381 CDD:275380 7/22 (32%)
leucine-rich repeat 382..405 CDD:275380 6/22 (27%)
leucine-rich repeat 406..429 CDD:275380 6/22 (27%)
leucine-rich repeat 430..452 CDD:275380 9/22 (41%)
leucine-rich repeat 453..500 CDD:275380 7/46 (15%)
leucine-rich repeat 501..521 CDD:275380 8/19 (42%)
leucine-rich repeat 525..547 CDD:275380 7/21 (33%)
leucine-rich repeat 548..573 CDD:275380 4/16 (25%)
leucine-rich repeat 604..640 CDD:275380
LRR_8 616..>660 CDD:404697
leucine-rich repeat 641..688 CDD:275380
leucine-rich repeat 689..816 CDD:275380
LRR <794..>920 CDD:443914
leucine-rich repeat 817..864 CDD:275380
leucine-rich repeat 865..888 CDD:275380
leucine-rich repeat 889..910 CDD:275380
TIR 1076..1211 CDD:214587
sym-1NP_510426.1 leucine-rich repeat 62..81 CDD:275380 6/24 (25%)
LRR <84..408 CDD:443914 95/360 (26%)
leucine-rich repeat 86..108 CDD:275380 6/30 (20%)
leucine-rich repeat 110..133 CDD:275380 9/22 (41%)
leucine-rich repeat 134..157 CDD:275380 5/22 (23%)
leucine-rich repeat 158..182 CDD:275380 8/23 (35%)
leucine-rich repeat 183..206 CDD:275380 7/48 (15%)
leucine-rich repeat 207..230 CDD:275380 7/22 (32%)
leucine-rich repeat 231..254 CDD:275380 7/22 (32%)
leucine-rich repeat 255..278 CDD:275380 6/22 (27%)
leucine-rich repeat 279..302 CDD:275380 6/22 (27%)
leucine-rich repeat 303..323 CDD:275380 8/19 (42%)
leucine-rich repeat 350..373 CDD:275380 4/22 (18%)
leucine-rich repeat 374..394 CDD:275380 8/19 (42%)
leucine-rich repeat 399..410 CDD:275378 4/10 (40%)
Blue background indicates that the domain is not in the aligned region.

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