DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tollo and Lrrtm2

DIOPT Version :9

Sequence 1:NP_524757.1 Gene:Tollo / 44497 FlyBaseID:FBgn0029114 Length:1346 Species:Drosophila melanogaster
Sequence 2:NP_821072.1 Gene:Lrrtm2 / 107065 MGIID:2389174 Length:515 Species:Mus musculus


Alignment Length:368 Identity:97/368 - (26%)
Similarity:163/368 - (44%) Gaps:71/368 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 GMVCPLK-----------------------------SLQHLNASYNKIQDISNFYFSASLSSRKA 205
            ||.||.|                             ||:|     |.|..:....|::.      
Mouse    31 GMACPPKCRCEKLLFYCDSQGFHSVPNATDKGSLGLSLRH-----NHITALERDQFASF------ 84

  Fly   206 RVCGSTLQSLDLSANKMVSLPTAMLSALGRLTHLNMAKNSMSFLADRAFEGLLSLRVVDLSANRL 270
                |.|..|.|..|::.::.......|.:|..|.::.|.:.:|.:..|..|::|:.:|||.|:|
Mouse    85 ----SQLTWLHLDHNQISTVKEDAFQGLYKLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQL 145

  Fly   271 TSLPPELFAETKQLQEIYLRNNSINVLAPGIFGELAELLVLDLASNELNSQWINAATFVGLKRLM 335
            :||.||||...::||.::||:||:..:...:|.:...|..|||::|.|.|...|.  |.||.:|.
Mouse   146 SSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNG--FAGLIKLR 208

  Fly   336 MLDLSANKISRLE-AHIFRPLASLQILKLEDNYIDQLPGGIFADLTNLHTLILSRNRISVIEQRT 399
            .|.|..|:::::. ||..| |:||..|.|:.|.|..|..|:....:.|..|.|:.|.|..|:...
Mouse   209 ELHLEHNQLTKINFAHFLR-LSSLHTLFLQWNKISNLTCGMDWTWSTLEKLDLTGNEIKAIDLTV 272

  Fly   400 LQGLKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDNKLQAVPEALA-------------HVQ 451
            .:.:.||.:|.:|.|:::.:|.:.|.:...|..:.|:.|..:..|...|             |..
Mouse   273 FETMPNLKILLMDNNKLNSLDSKILNSLKSLTTVGLSGNLWECSPRVCALASWLGSFQGRWEHSI 337

  Fly   452 LLKTLD--VGENMISQIE--------NTSITQLESLYGLRMTE 484
            |..:.|  .||:::..:.        :|::|.:.:.|....||
Mouse   338 LCHSPDHTQGEDILDAVHGFQLCWNLSTTVTAMATTYRDPTTE 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TolloNP_524757.1 LRR_RI <85..281 CDD:238064 35/139 (25%)
leucine-rich repeat 100..123 CDD:275380
leucine-rich repeat 124..144 CDD:275380
LRR_8 152..222 CDD:290566 16/80 (20%)
leucine-rich repeat 154..177 CDD:275380 5/35 (14%)
leucine-rich repeat 178..201 CDD:275380 5/22 (23%)
LRR 210..656 CDD:227223 86/299 (29%)
leucine-rich repeat 212..235 CDD:275380 5/22 (23%)
leucine-rich repeat 236..259 CDD:275380 6/22 (27%)
leucine-rich repeat 260..283 CDD:275380 12/22 (55%)
LRR_RI 276..558 CDD:238064 65/233 (28%)
leucine-rich repeat 284..307 CDD:275380 7/22 (32%)
leucine-rich repeat 308..333 CDD:275380 11/24 (46%)
leucine-rich repeat 334..357 CDD:275380 8/23 (35%)
leucine-rich repeat 358..381 CDD:275380 7/22 (32%)
leucine-rich repeat 382..405 CDD:275380 6/22 (27%)
leucine-rich repeat 406..429 CDD:275380 6/22 (27%)
leucine-rich repeat 430..452 CDD:275380 6/34 (18%)
leucine-rich repeat 453..500 CDD:275380 8/42 (19%)
leucine-rich repeat 501..521 CDD:275380
leucine-rich repeat 525..547 CDD:275380
leucine-rich repeat 548..573 CDD:275380
leucine-rich repeat 604..640 CDD:275380
leucine-rich repeat 641..688 CDD:275380
leucine-rich repeat 689..816 CDD:275380
LRR_8 815..875 CDD:290566
leucine-rich repeat 817..864 CDD:275380
LRR_8 864..921 CDD:290566
leucine-rich repeat 865..888 CDD:275380
leucine-rich repeat 889..910 CDD:275380
TIR 1076..1211 CDD:214587
Lrrtm2NP_821072.1 LRR 1 63..83 6/24 (25%)
LRR <65..312 CDD:227223 79/264 (30%)
leucine-rich repeat 66..86 CDD:275380 6/34 (18%)
LRR 2 86..107 4/20 (20%)
leucine-rich repeat 87..110 CDD:275380 5/22 (23%)
LRR 3 110..131 5/20 (25%)
leucine-rich repeat 111..134 CDD:275380 6/22 (27%)
LRR 4 134..155 12/20 (60%)
leucine-rich repeat 135..158 CDD:275380 12/22 (55%)
LRR 5 158..179 7/20 (35%)
leucine-rich repeat 159..182 CDD:275380 7/22 (32%)
LRR 6 182..203 9/22 (41%)
leucine-rich repeat 183..206 CDD:275380 11/24 (46%)
LRR 7 206..227 6/20 (30%)
leucine-rich repeat 207..230 CDD:275380 8/23 (35%)
LRR 8 230..251 8/20 (40%)
leucine-rich repeat 231..254 CDD:275380 7/22 (32%)
LRR 9 254..275 6/20 (30%)
leucine-rich repeat 255..278 CDD:275380 6/22 (27%)
LRR 10 278..299 7/20 (35%)
leucine-rich repeat 279..300 CDD:275380 6/20 (30%)
PCC 284..>351 CDD:188093 14/66 (21%)
Involved in DLG4-binding. /evidence=ECO:0000250 512..515
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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