DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uba2 and ECR1

DIOPT Version :9

Sequence 1:NP_524756.2 Gene:Uba2 / 44496 FlyBaseID:FBgn0029113 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_568370.1 Gene:ECR1 / 832038 AraportID:AT5G19180 Length:454 Species:Arabidopsis thaliana


Alignment Length:528 Identity:119/528 - (22%)
Similarity:189/528 - (35%) Gaps:202/528 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GVFP-PTLQELVKK-SKVLVVGAGGIGCEVLKNLVLSGFTDIEIIDLDTIDLSNLNRQFLFHREH 69
            |..| |.|::.::. .::||:||||:|||:||:|.||||.::|:||:|.|:::||||||||..|.
plant    32 GFVPGPGLRDDIRDYVRILVIGAGGLGCELLKDLALSGFRNLEVIDMDRIEVTNLNRQFLFRIED 96

  Fly    70 VGKSKARVARESALSFNPDAKITAYHDSVTSTDYGVNFFKKFDLVLSALDNRAARNHVNRMC--- 131
            |||.||.||.:..:......:|..:...:  .|..:.|:..|:::...||:..||.::|.:.   
plant    97 VGKPKAEVAAKRVMERVSGVEIVPHFSRI--EDKEIEFYNDFNIIALGLDSIEARKYINGVACGF 159

  Fly   132 --LNAD--------VPLIESGTAGYNGQVELIKRGLTQCYECT-----PKDKQRSFPGCTIRNTP 181
              .|.|        .|:::.||.|:.|...:|..|:|.|:|||     |:.|   ||.||:..||
plant   160 LEYNEDDTPKRETIKPMVDGGTEGFKGHARVILPGVTPCFECTIYLFPPQVK---FPLCTLAETP 221

  Fly   182 SEPIHCIVWAKHLFNQLFGESLEDEDISPDAADPDAKEKDGGDGNGEPKGDGKEKGEESKEEKEA 246
            ....|||.:| ||                                                    
plant   222 RNAAHCIEYA-HL---------------------------------------------------- 233

  Fly   247 KEDTANGNIMRINTRQWAKDCNYDAGKLFNKFFNEDITYLLRMSNLWKTRKAPVPVQWDTLLPEG 311
                                                                   :||:|:    
plant   234 -------------------------------------------------------IQWETV---- 239

  Fly   312 SSGDQKDVAKQHHKVWSIEECAQVFANSLKELSANFLKLEGDDTLAWDKDDQPAMDFVAACANVR 376
            ..|...|..:..|..|..:|..:                                         |
plant   240 HRGKTFDPDEPEHMKWVYDEAIR-----------------------------------------R 263

  Fly   377 SHIFDIERKSRFEIKSMAGNIIPAIATTNAITAGISVMRAFKVLEAKWEQCKAVYARLRPNARNH 441
            :.:|.|...:....:.:..|||||||:||||.:....:...|::.|    |..............
plant   264 AELFGIPGVTYSLTQGVVKNIIPAIASTNAIISAACALETLKIVSA----CSKTLVNYLTYNGGE 324

  Fly   442 FLVPDASLPGPNPNCHVCASDPAITLKIDTKRMRIKELRDEVLVKTLNMLNPDVTVQSNGSILIS 506
            .|..:.:....:..|.||.  |.|.:::||         ...|.|.:.||      :.:..:|:|
plant   325 GLYTEVTKFERDTECLVCG--PGILIELDT---------SVTLSKFIEML------EDHPKLLLS 372

  Fly   507 S---EEGE 511
            .   ::||
plant   373 KASVKQGE 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba2NP_524756.2 ThiF 7..>177 CDD:279270 69/189 (37%)
Uba2_SUMO 21..459 CDD:238766 101/455 (22%)
UAE_UbL 467..552 CDD:291402 10/48 (21%)
UBA2_C 573..691 CDD:292812
ECR1NP_568370.1 ThiF 36..341 CDD:279270 103/466 (22%)
Uba3_RUB 48..343 CDD:238765 102/456 (22%)
E2_bind 350..439 CDD:285976 10/46 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D686413at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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