DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uba2 and uba1

DIOPT Version :9

Sequence 1:NP_524756.2 Gene:Uba2 / 44496 FlyBaseID:FBgn0029113 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_998227.1 Gene:uba1 / 406335 ZFINID:ZDB-GENE-040426-2009 Length:1058 Species:Danio rerio


Alignment Length:493 Identity:143/493 - (29%)
Similarity:218/493 - (44%) Gaps:87/493 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VFPPTLQELVKKSKVLVVGAGGIGCEVLKNLVL----SGFTDIEIIDLDTIDLSNLNRQFLFHRE 68
            ||...||||:.|.:..:||||.||||:|||..:    ||..::.:.|:|||:.|||||||||...
Zfish   458 VFGSKLQELLAKQRYFLVGAGAIGCELLKNFAMMGLASGEGEVIVTDMDTIEKSNLNRQFLFRPW 522

  Fly    69 HVGKSKARVARESALSFNPDAKITAYHDSV---TSTDYGVNFFKKFDLVLSALDNRAARNHVNRM 130
            .|.|.|:..|..:....||..:||.:.:.|   |...|..:||:..|.|.:||||..||.:::|.
Zfish   523 DVTKMKSETAAAAVKQMNPSVRITGHQNRVGPDTEKVYDDDFFECLDGVANALDNVDARMYMDRR 587

  Fly   131 CLNADVPLIESGTAGYNGQVELIKRGLTQCYECTPKDKQRSFPGCTIRNTPSEPIHCIVWAKHLF 195
            |:....||:||||.|..|.|:::...:|:.|..:....::|.|.||::|.|:...|.:.||:..|
Zfish   588 CVYYRKPLLESGTLGTKGNVQVVIPFITESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEF 652

  Fly   196 NQLFGESLEDEDISPDAADPDAKEKDGGDGNGEPKGDGKEKGEESKEEKEAKEDTANGNIMRINT 260
            ..||.:..  |:......|....|:           ..|..|.:..|..|    :...:::....
Zfish   653 EGLFKQPA--ENALQYLTDSKFMER-----------TLKLPGAQPLEVVE----SVYKSLVTDRP 700

  Fly   261 RQWAKDC------------NYDAGKLFNKFFNEDIT----------------------------Y 285
            |.| .||            |.:..:|.:.|..:.:|                            |
Zfish   701 RNW-DDCVTWARNHWQCQYNNNIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLEFSTNNDLHMDY 764

  Fly   286 LLRMSNLW---------KTRKAPVPVQWDTLLPEGSSGDQKDVAKQHHKVWSIEEC-AQVFANSL 340
            :|..:||:         ..|.|...:..|..:||.:   .|...|.|.....::.. |.|..:.|
Zfish   765 ILAAANLYALSYGLPSCNDRSALTKLLQDIKVPEFT---PKSGVKIHVSDQELQSANASVDDSRL 826

  Fly   341 KELSANFLKLEGDD-----TLAWDKDDQP--AMDFVAACANVRSHIFDIERKSRFEIKSMAGNII 398
            :||......||...     .:.::|||..  .|||:.|.:|:|:..:||....|.:.|.:||.||
Zfish   827 EELKTLLPSLEASSQFKLCPIEFEKDDDTNFHMDFIVAASNLRAENYDIPPADRHKSKLIAGKII 891

  Fly   399 PAIATTNAITAGISVMRAFKVLEA--KWEQCKAVYARL 434
            ||||||.|...|:..:...|:::.  |.|..|..:..|
Zfish   892 PAIATTTAAVVGLVCLELLKIVQGHKKLESYKNGFMNL 929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba2NP_524756.2 ThiF 7..>177 CDD:279270 70/175 (40%)
Uba2_SUMO 21..459 CDD:238766 136/480 (28%)
UAE_UbL 467..552 CDD:291402
UBA2_C 573..691 CDD:292812
uba1NP_998227.1 Ube1 49..1055 CDD:273603 143/493 (29%)
Ube1_repeat1 54..436 CDD:238768
E1_4HB 303..366 CDD:292809
Ube1_repeat2 471..1011 CDD:238767 136/480 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.