DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uba2 and Uba3

DIOPT Version :9

Sequence 1:NP_524756.2 Gene:Uba2 / 44496 FlyBaseID:FBgn0029113 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_610913.1 Gene:Uba3 / 36539 FlyBaseID:FBgn0263697 Length:450 Species:Drosophila melanogaster


Alignment Length:571 Identity:134/571 - (23%)
Similarity:202/571 - (35%) Gaps:231/571 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LQELVKKSKVLVVGAGGIGCEVLKNLVLSGFTDIEIIDLDTIDLSNLNRQFLFHREHVGKSKARV 77
            |:.|..|.:||::||||:|||:||:|.|.||.::.:||:|||:||||||||||.|..:|.|||..
  Fly    42 LEFLQTKCQVLIIGAGGLGCELLKDLALMGFGNLHVIDMDTIELSNLNRQFLFRRTDIGASKAEC 106

  Fly    78 ARESALSFNPDAKITAYHDSVTSTDYGVNFFKKFDLVLSALDNRAARNHVNRMCL---------- 132
            |.....:..|..::|.:...:  .|:..:|:::|.||:..||:..||..:|.|.|          
  Fly   107 AARFINARVPTCRVTPHFKKI--QDFDESFYQQFHLVVCGLDSIVARRWINGMLLSMLRYEEDGT 169

  Fly   133 ---NADVPLIESGTAGYNGQVELIKRGLTQCYECT----PKDKQRSFPGCTIRNTPSEPIHCIVW 190
               ::.||:|:.||.|:.|...:|..|.|.|.|||    |  .|.::|.|||.|||..|.|||.:
  Fly   170 IDTSSIVPMIDGGTEGFKGNARVILPGFTACIECTLDLFP--PQVNYPLCTIANTPRLPEHCIEY 232

  Fly   191 AKHLFNQLFGESLEDEDISPDAADPDAKEKDGGDGNGEPKGDGKEKGEESKEEKEAKEDTANGNI 255
            .|                                                               
  Fly   233 VK--------------------------------------------------------------- 234

  Fly   256 MRINTRQWAKDCNYDAGKLFNKFFNEDITYLLRMSNLWKTRKAPVPVQWDTLLPEGSSGDQKDVA 320
                                                         .:||:...|.|         
  Fly   235 ---------------------------------------------IIQWEKQNPFG--------- 245

  Fly   321 KQHHKVWSIEECAQVFANSLKELSANFLKLEGDDT--LAWDKDDQPAMDFVAACANVRSHIFDIE 383
                                       :.|:|||.  :.|          :...|..||:.|:|.
  Fly   246 ---------------------------VPLDGDDPQHIGW----------IYERALERSNEFNIT 273

  Fly   384 RKSRFEIKSMAGNIIPAIATTNAITAGISVMRAFKVLEAKWEQCKAVYARLRPNARNHFLVPDAS 448
            ..:...::.:..:||||:|:|||..|....:..||:..:.::           :..|:....|  
  Fly   274 GVTYRLVQGVVKHIIPAVASTNAAIAAACALEVFKLATSCYD-----------SMANYLNFND-- 325

  Fly   449 LPG---------PNPNCHVCASDP---------------AITLKIDTKRMRIKELRDEVLVK--- 486
            |.|         .:.||..|::.|               .|.|..|:.|.::|......::|   
  Fly   326 LDGIYTYTYEAEKSENCLACSNTPQPLPIEDPNTTTLEDVIKLLCDSPRFQLKSPALTTVMKDGK 390

  Fly   487 --TLNMLNPDVTVQSNGSILISSEEGETECNDGKLLSELNIVDGVILKCDD 535
              ||.|..            :.|.|..|..|..:.|.||.:.||..|...|
  Fly   391 RRTLYMSG------------VKSIEEATRKNLTQSLGELGLHDGQQLTVTD 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba2NP_524756.2 ThiF 7..>177 CDD:279270 71/180 (39%)
Uba2_SUMO 21..459 CDD:238766 109/465 (23%)
UAE_UbL 467..552 CDD:291402 19/74 (26%)
UBA2_C 573..691 CDD:292812
Uba3NP_610913.1 ThiF 48..>220 CDD:279270 70/175 (40%)
Uba3_RUB 50..346 CDD:238765 109/466 (23%)
E2_bind 357..442 CDD:285976 20/85 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446854
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D686413at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10953
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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