DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uba2 and Uba1

DIOPT Version :9

Sequence 1:NP_524756.2 Gene:Uba2 / 44496 FlyBaseID:FBgn0029113 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_477310.2 Gene:Uba1 / 35998 FlyBaseID:FBgn0023143 Length:1191 Species:Drosophila melanogaster


Alignment Length:477 Identity:142/477 - (29%)
Similarity:219/477 - (45%) Gaps:81/477 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VFPPTLQELVKKSKVLVVGAGGIGCEVLKNLVL----SGFTDIEIIDLDTIDLSNLNRQFLFHRE 68
            :|....||.:..||..:||||.||||:|||..:    :|...|.:.|:|.|:.|||||||||...
  Fly   593 IFGKKFQEKLADSKWFIVGAGAIGCELLKNFGMLGLGTGNGQIFVTDMDLIEKSNLNRQFLFRPH 657

  Fly    69 HVGKSKARVARESALSFNPDAKITAYHDSV---TSTDYGVNFFKKFDLVLSALDNRAARNHVNRM 130
            .|.|.|:..|.::....||:..:|||...|   |...:..:||.|.|.|.:||||..||.:::|.
  Fly   658 DVQKPKSMTAADAIKRMNPEVNVTAYELRVGAETEKVFSEDFFGKLDGVANALDNVDARIYMDRK 722

  Fly   131 CLNADVPLIESGTAGYNGQVELIKRGLTQCYECTPKDKQRSFPGCTIRNTPSEPIHCIVWAKHLF 195
            |:...:||:|:||.|..|.|::|....|:.|..:....::|.|.||::|.|:...|.:.||:..|
  Fly   723 CIFNRIPLVETGTLGTLGNVQVIVPFATESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDAF 787

  Fly   196 NQLFGESLEDEDISPDAADPDAKEKDGGDGNGEPKGDGKEKGEESKEEKEAKEDTANGNIMRINT 260
            ..:|.:|.  |:.:...|||...|:..       |..|.:..|.....|:|..|....:.  .:.
  Fly   788 EGVFKQSA--ENAAQYIADPQFTERIA-------KLPGIQPLEILDSIKKALIDDKPKSF--AHC 841

  Fly   261 RQWAK------DCNYDAGKLFNKFFNEDITYLLRMSN---LWK-TRKAPVPVQWD---------- 305
            .:||:      ..|.....||| |..:.||     |:   .|. .::.|.|:.:|          
  Fly   842 VEWARLYWEDQYVNQIKQLLFN-FPPDQIT-----SSGQPFWSGPKRCPDPLVFDVNDPMHLDFI 900

  Fly   306 ----TLLPEGSSGDQ----KDVA-------------KQHHKVWSIEECAQVFANS---------- 339
                .|..|....:|    :.:|             :...|:.:.|..|...||:          
  Fly   901 YAAANLRAEVYGIEQVRNRETIAELVQKVKVPEFKPRSGVKIETNEAAAAASANNFDDGELDQDR 965

  Fly   340 ----LKELSANFLKLEGDDTLAWDKDDQP--AMDFVAACANVRSHIFDIERKSRFEIKSMAGNII 398
                :.||..|..|......|.::|||..  .|||:.||:|:|:..:.|....|.:.|.:||.||
  Fly   966 VDKIISELLKNADKSSKITPLEFEKDDDSNLHMDFIVACSNLRAANYKIPPADRHKSKLIAGKII 1030

  Fly   399 PAIATTNAITAGISVMRAFKVL 420
            ||||||.::.:|::|:...|::
  Fly  1031 PAIATTTSVLSGLAVLEVIKLI 1052

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba2NP_524756.2 ThiF 7..>177 CDD:279270 68/175 (39%)
Uba2_SUMO 21..459 CDD:238766 138/464 (30%)
UAE_UbL 467..552 CDD:291402
UBA2_C 573..691 CDD:292812
Uba1NP_477310.2 Ube1 194..1188 CDD:273603 142/477 (30%)
Ube1_repeat1 199..574 CDD:238768
E1_4HB 447..510 CDD:292809
Ube1_repeat2 606..1144 CDD:238767 138/464 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446855
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10953
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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