DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uba2 and Uba4

DIOPT Version :10

Sequence 1:NP_524756.2 Gene:Uba2 / 44496 FlyBaseID:FBgn0029113 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_609240.2 Gene:Uba4 / 34187 FlyBaseID:FBgn0032054 Length:453 Species:Drosophila melanogaster


Alignment Length:147 Identity:44/147 - (29%)
Similarity:71/147 - (48%) Gaps:1/147 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VKKSKVLVVGAGGIGCEVLKNLVLSGFTDIEIIDLDTIDLSNLNRQFLFHREHVGKSKARVARES 81
            :|.|.||:||.||:||...:.|..:|...:.::|.|.::.||.:||.|...:..|.|||..||.:
  Fly    89 LKNSSVLIVGLGGLGCPAAQYLAAAGCGHLGLVDYDEVERSNFHRQILHSEDRCGMSKAESARIA 153

  Fly    82 ALSFNPDAKITAYHDSVTSTDYGVNFFKKFDLVLSALDNRAARNHVNRMCLNADVPLIESGTAGY 146
            .|..||..:|.. |..:......::..:.:|:||...||...|..::..|:....||:.......
  Fly   154 LLELNPHCEIQC-HSRMLYPHNAMHIIRGYDVVLDCTDNVPTRYLLSDACVMLSKPLVSGSALKM 217

  Fly   147 NGQVELIKRGLTQCYEC 163
            :||:.:.......||.|
  Fly   218 DGQLTVYNYANGPCYRC 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba2NP_524756.2 Uba2_SUMO 21..459 CDD:238766 42/143 (29%)
UAE_UbL 467..552 CDD:464286
Uba4NP_609240.2 ThiF 65..311 CDD:440244 44/147 (30%)
RHOD_ThiF 336..453 CDD:238784
Blue background indicates that the domain is not in the aligned region.

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