DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uba2 and Uba6

DIOPT Version :9

Sequence 1:NP_524756.2 Gene:Uba2 / 44496 FlyBaseID:FBgn0029113 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001100683.1 Gene:Uba6 / 305268 RGDID:1308324 Length:1053 Species:Rattus norvegicus


Alignment Length:656 Identity:166/656 - (25%)
Similarity:260/656 - (39%) Gaps:180/656 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TLQELVKKSKVLVVGAGGIGCEVLKNLVLSGFTD------IEIIDLDTIDLSNLNRQFLFHREHV 70
            ||.:.::...:.:||.|.||||:|||..|.|...      :.:.|.|.|:.|||||||||...|:
  Rat   453 TLCQKLQNLNIFLVGCGAIGCEMLKNFALLGVGTGREKGMVTVTDPDLIEKSNLNRQFLFRPHHI 517

  Fly    71 GKSKARVARESALSFNPDAKITAYHDSV---TSTDYGVNFFKKFDLVLSALDNRAARNHVNRMCL 132
            .|.|:..|.|:.|..||..||.|:.:.|   |.:.|...|:.|.|:|::||||..||.:|:..||
  Rat   518 QKPKSYTAAEATLKINPQLKIDAHLNKVCPATESTYSDEFYNKQDIVITALDNVEARRYVDSRCL 582

  Fly   133 NADVPLIESGTAGYNGQVELIKRGLTQCYECTPKDKQRSFPGCTIRNTPSEPIHCIVWAKHLFNQ 197
            ....||::|||.|..|..|:|...||:.|.......:...|.||:::.|:...|.|.||:..|..
  Rat   583 ANLRPLLDSGTMGTKGHTEIIVPQLTESYNSHRDPPEEEIPFCTLKSFPAAVEHTIQWARDKFES 647

  Fly   198 LFGE--SLEDE--DISPDAADPDAKEKDGGDGNGEPKGDGKEKGEESKEEKEAKEDTANG----- 253
            .|..  ||.::  ...|.|.|...|.::|                          .:..|     
  Rat   648 SFSHKPSLFNKFWQAYPSAEDVLQKIQNG--------------------------QSLEGCFQVI 686

  Fly   254 NIMRINTRQWAKDCNYDAGKLFNKFFNEDITYLLRM----------SNLWKT-RKAPVPVQWDTL 307
            .::....|.|:: |...|...|.|:||.....||..          |..|:: ::.|.|:::|..
  Rat   687 KLLSRRPRMWSQ-CVELARLKFEKYFNHKALQLLHCFPLDTRLKDGSLFWQSPKRPPSPIKFDLN 750

  Fly   308 LPEGSS----------------GDQKDVA----------------KQHHKVWSIEECAQ------ 334
            .|...|                ..:||::                |..:||...:|.|:      
  Rat   751 EPLHLSFLQNAAKLYATVYCIPFSEKDLSVDSLMDILSEVKIQEFKPSNKVVQTDETARKPDHVP 815

  Fly   335 ---------VFANSLKELSANFLKLEGDD----TLAWDKDDQP--AMDFVAACANVRSHIFDIER 384
                     ||... |.||:|  |....|    .|:::|||..  .:||:.|.:|:|:.:::||.
  Rat   816 VSSEDERNAVFQLE-KALSSN--KATKSDLQMAVLSFEKDDDSNGHIDFITAASNLRAKMYNIEP 877

  Fly   385 KSRFEIKSMAGNIIPAIATTNAITAGISVMRAFKVLEAKWEQCKAVYARLRPNARNHFLVPDASL 449
            ..||:.|.:||.|||||||:.|..:|:..:...||                              
  Rat   878 ADRFKTKRIAGKIIPAIATSTAAVSGLVALEMIKV------------------------------ 912

  Fly   450 PGPNP-----NCHVCASDPAITLKIDTKRMRIKELRDEV-----------------------LVK 486
            .|..|     ||.:..:.|.|.. .:|..:|..|:|:.:                       .||
  Rat   913 AGGYPFDAYKNCFLNLAIPIIVF-TETSEVRKTEIRNGISFTIWDRWTVHGKEDFTLSDFINAVK 976

  Fly   487 TLNMLNPDVTVQSNGSILISSEEGETECNDGKLLSELNIVDGVILKCDDFFQNYELSIIISHFDA 551
            ....:.|.:.||....:.:....|..:        .|.:....::|.....:..:|::..:. ||
  Rat   977 EKYGIEPTMVVQGVKMLYVPVMPGHAK--------RLKLTMHKLVKPSTEKKYVDLTVSFAP-DA 1032

  Fly   552 ERDENL 557
            :.||:|
  Rat  1033 DGDEDL 1038

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba2NP_524756.2 ThiF 7..>177 CDD:279270 67/173 (39%)
Uba2_SUMO 21..459 CDD:238766 144/524 (27%)
UAE_UbL 467..552 CDD:291402 14/107 (13%)
UBA2_C 573..691 CDD:292812
Uba6NP_001100683.1 Ube1 38..1046 CDD:273603 166/656 (25%)
Ube1_repeat1 43..428 CDD:238768
E1_4HB 298..358 CDD:292809
Ube1_repeat2 462..1005 CDD:238767 156/611 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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