DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uba2 and Uba1y

DIOPT Version :9

Sequence 1:NP_524756.2 Gene:Uba2 / 44496 FlyBaseID:FBgn0029113 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_030107423.1 Gene:Uba1y / 22202 MGIID:98891 Length:1087 Species:Mus musculus


Alignment Length:605 Identity:166/605 - (27%)
Similarity:257/605 - (42%) Gaps:138/605 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VFPPTLQELVKKSKVLVVGAGGIGCEVLKNLVLSGF-----TDIEIIDLDTIDLSNLNRQFLFHR 67
            ||...|||.:.|.|..:||||.||||:|||..:.|.     .:|.:.|:|||:.|||||||||..
Mouse   456 VFGSDLQEKLGKQKYFLVGAGAIGCELLKNFAMIGLGCGEDGEITVTDMDTIEKSNLNRQFLFRP 520

  Fly    68 EHVGKSKARVARESALSFNPDAKITAYHDSV---TSTDYGVNFFKKFDLVLSALDNRAARNHVNR 129
            ..:.|.|:..|..:....||..:|.::.:.|   |...|..:||:|.|.|.:||||..||.:|:|
Mouse   521 WDITKLKSETAAAAVRDINPHIRIFSHQNRVGPETEHVYDDDFFQKLDGVANALDNVDARLYVDR 585

  Fly   130 MCLNADVPLIESGTAGYNGQVELIKRGLTQCYECTPKDKQRSFPGCTIRNTPSEPIHCI------ 188
            .|:....||:||||.|..|.|:::...||:.|..:....::|.|.||::|.|:...|.:      
Mouse   586 RCVYYRKPLLESGTLGTKGNVQVVVPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTVQGRLHA 650

  Fly   189 -----------------------VWAKHLFNQLFGESLEDEDISPDAADPDAKEKDGGDGNGEPK 230
                                   .||:..|..||.:|.  |:::....||...|:          
Mouse   651 LKKVARWTSGFFLCTSVLVLLVLPWARDEFEGLFKQSA--ENVNQYLTDPKFMER---------- 703

  Fly   231 GDGKEKGEESKEEKEAKEDTANGNIMRINTRQWAKDCNYDAGKLFNKFFNEDITYLLRM------ 289
             ..:..|.:..|..||    .:.:::....:.|| ||...|.:.::..::.:|..||..      
Mouse   704 -TLQLAGTQPLEVLEA----IHCSLVLQRPQTWA-DCVTWAYQHWHTQYSHNIQQLLHNFPPAQL 762

  Fly   290 ----SNLWK-TRKAPVPVQWDTLLP------------------EGSSGDQKDVAKQHHKV----- 326
                :..|. .::.|.|:.:|...|                  .|.|.|...|||....:     
Mouse   763 TSSGALFWSGPKRCPHPLTFDINNPLHLDYVMAAANLFAQTYGLGGSQDCAVVAKLLQSLPVPKF 827

  Fly   327 ---------WSIEECAQVFANSLKELSANFLK--LEGDDTLA--------WDKDDQP--AMDFVA 370
                     .|.:|.....|.::.:.....||  |...|.|.        ::|||..  .|||:.
Mouse   828 APKSGIRIHVSEQELQSTSATTIDDSHLEELKTALPTPDKLLGFKMYPIDFEKDDDSNFHMDFIV 892

  Fly   371 ACANVRSHIFDIERKSRFEIKSMAGNIIPAIATTNAITAGISVMRAFKVLEAKWEQCKAVYARLR 435
            |.:|:|:..:.|....|.:.|.:||.||||||||.:...|:..:..:||::.. :|.::.     
Mouse   893 AASNLRAENYGISPADRHKSKLIAGKIIPAIATTTSAIVGLVCLELYKVVQGH-QQLESY----- 951

  Fly   436 PNARNHFL---VPDASLPGP-NPNCHVCASDPAITL--KIDT-------KRMRIKELRDEVLVKT 487
               :|.|:   :|..|...| .|.||. ..|...||  :.|.       :.|.:|:..|  ..||
Mouse   952 ---KNSFINLALPLFSFSAPLAPECHQ-YYDQEWTLWDRFDVQGLQPSGEEMTLKQFLD--YFKT 1010

  Fly   488 LNMLNPDVTVQSNG-SILIS 506
            .:.|  :|.:.|.| |:|.|
Mouse  1011 EHKL--EVIMLSQGVSMLYS 1028

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba2NP_524756.2 ThiF 7..>177 CDD:279270 71/176 (40%)
Uba2_SUMO 21..459 CDD:238766 144/533 (27%)
UAE_UbL 467..552 CDD:291402 14/50 (28%)
UBA2_C 573..691 CDD:292812
Uba1yXP_030107423.1 Ube1 48..1084 CDD:273603 166/605 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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