DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluRIB and Ir75b

DIOPT Version :9

Sequence 1:NP_001261621.2 Gene:GluRIB / 44484 FlyBaseID:FBgn0264000 Length:1182 Species:Drosophila melanogaster
Sequence 2:NP_001137966.2 Gene:Ir75b / 8673994 FlyBaseID:FBgn0261402 Length:605 Species:Drosophila melanogaster


Alignment Length:861 Identity:152/861 - (17%)
Similarity:280/861 - (32%) Gaps:344/861 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 IIYLYDSHDGLL-RLQQIYQGLRPGNESFQVELVKRISNVSMAIEFL-HTLEQIGRFENKHIVLD 235
            |::...||..|| :.:.|:...:|.:           |::.:..:|| |.:.::|.|      ||
  Fly    23 ILHCSLSHLALLAQSKNIFTQFQPLH-----------SDIQLNDDFLNHNILKLGVF------LD 70

  Fly   236 CPTEMAKQILIQHVRDLRLGRR----TYHYLLSGLVMDDRWESEIIEFGAINITGFRIVDTNRRL 296
            ...:.:..:|     |:...:|    .||:|:....|:                 |.:::::.:.
  Fly    71 INCDKSGTVL-----DMASAKRFFSHRYHWLIYDRSMN-----------------FSVLESHFKE 113

  Fly   297 VREFYD---SWKRLDPQMSVGAGRESISAQAALMYDAVFVLVEAFNKILRKKPDQFRNNVQRRSQ 358
            .:.|.|   ::...||                  :...|:|.:.:||                  
  Fly   114 AQIFVDADVTYVTHDP------------------FSKNFLLYDVYNK------------------ 142

  Fly   359 TLMVAQAAASTSSDGYNYSASGGGGGNGGAGGGFAGSDSGGSGGM-ASRALDCNTAKGWVNAWEH 422
                                               |...||...: |.|.:.||         :.
  Fly   143 -----------------------------------GRQLGGELNITADREIFCN---------KT 163

  Fly   423 GDKISRYLRKV----------EIEGLTGDIKFNDDGRRVNYTLHVVEMTVNSAMVKVAEWNDDAG 477
            ..::.|||.::          ...|||           :..|..|..:.:|.::.::.::     
  Fly   164 NCRVERYLSELYTRSALQHRKSFTGLT-----------MRATAVVTALPLNVSIKEIFDF----- 212

  Fly   478 LQPLNAKY-VRLRPHVEFEKNRTYIVTTVLEEPYIMLKQVAFGEKLHGNNRFEGY--CKDLADLL 539
               :|:|| ::|                   :.|..|                ||  .:.|.|:|
  Fly   213 ---MNSKYRIQL-------------------DTYARL----------------GYQARQPLRDML 239

  Fly   540 AKELGINYELR-LVKDGNYGSEKSSAHGGWDGMVGELVRKEADIAIAAMTITAERERVIDFSKPF 603
              :....|..| ...|||       |.|   ||:|:|:..:||:|||....:.:|..   |.:|.
  Fly   240 --DCKFKYIFRDRWSDGN-------ATG---GMIGDLILDKADLAIAPFIYSFDRAL---FLQPI 289

  Fly   604 MSLGI---SIMIKKPVKQTPGVFS--FMNPLSQEIWV--SVIFSYIGVSI-VLFFVSRFSPHEWR 660
            ....:   ..|.:.|...:.|:.:  |:.|.|..:|:  :::....|..: |.|.:.|  ..:|:
  Fly   290 TKFSVFREICMFRNPRSVSAGLSATEFLQPFSGGVWLTFALLLLLAGCLLWVTFILER--RKQWK 352

  Fly   661 LVQQQPQQSQSPDPHAHHEQLANQQPPGIIGGAPLPAPPGPPTPGAQTAAGAAALQAALSAGSPG 725
                                      |.::....|             :.||..:|.|       
  Fly   353 --------------------------PSLLTSCLL-------------SFGAGCIQGA------- 371

  Fly   726 SGGSSSAVVNEFSVWNSFWFSLAAFMQQGCDLSPRSVSGRIAAASWFFFTLILISSYTANLAAFL 790
                              |            |:|||:.||:|     ||.|::.|....|....:
  Fly   372 ------------------W------------LTPRSMGGRMA-----FFALMVTSYLMYNYYTSI 401

  Fly   791 TVERMV-TPINSP----EDLA-----------MQTEVQYGTLLHGSTWDFFRRSQIGLH---NKM 836
            .|.::: .||.|.    :.||           :.|.:...|.......|.:|:..:|..   :|:
  Fly   402 VVSKLLGQPIKSNIRTLQQLADSNLDVGIEPTVYTRIYVETSEEPDVRDLYRKKVLGSKRSPDKI 466

  Fly   837 WEYMNSRKHVFVPTYDEGIKRVRNSKGKYALLVESPKNEYVN----AREPCDTMKVGRNLDTKGF 897
            |          :|| :.|:..||:.:|...:...:...|:|.    |.:.|:..::... |....
  Fly   467 W----------IPT-EAGVLSVRDQEGFVYITGVATGYEFVRKHFLAHQICELNEIPLR-DASHT 519

  Fly   898 GIATPLGSALKDPINLAVLTLKENGELIKLRNKWWYEKAECSTHKDGETSHS-ELSLSNVAGIFY 961
            .......|...:.|.|:.|.:.|.|...|....|...|..|..|     :|: .:.|...|.:|.
  Fly   520 HTVLAKRSPYAELIKLSELRMLETGVHFKHERSWMETKLHCYQH-----NHTVAVGLEYAAPLFI 579

  Fly   962 ILIGGLLVSVFVAILE 977
            ||:|.:::.:.:..||
  Fly   580 ILLGAIILCMGILGLE 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRIBNP_001261621.2 PBP1_iGluR_AMPA 43..478 CDD:107375 47/324 (15%)
ANF_receptor 55..461 CDD:279440 46/307 (15%)
PBP2_iGluR_AMPA 497..938 CDD:270433 90/474 (19%)
Lig_chan 632..967 CDD:278489 67/361 (19%)
Ir75bNP_001137966.2 Periplasmic_Binding_Protein_Type_2 253..553 CDD:304360 79/407 (19%)
Lig_chan 343..585 CDD:278489 64/341 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462520
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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