Protein Alignment GluRIB and GLR1.1

DIOPT Version :10

• Sequence 1: NP_001261621.2
• Gene: GluRIB / 44484
• FlyBaseID: FBgn0264000
• Length: 1182
• Species: Drosophila melanogaster
• Sequence 2: NP_187061.1
• Gene: GLR1.1 / 819566
• AraportID: AT3G04110
• Length: 808
• Species: Arabidopsis thaliana
• Alignment Length: 1022
• Identity: 189/1022 - (18%)
• Similarity: 354/1022 - (34%)
• Gaps: 305/1022 - (29%)

  Fly    31 GVSAQPS---LTEKIPLGAIFEQGTDE---VQSAFKYAMLN-HNLNVSSRR-------------- 74
            ||.|.||   :.|::.:|.:.:..:.:   ::::|..|:.: :.:|...|.
plant    16 GVVAAPSDDDVFEEVRVGLVVDLSSIQGKILETSFNLALSDFYGINNGYRTRVSVLVRDSQGDPI 80

  Fly    75 FELQAYVDVINTADAFKLSRLICNQFSRGVYSMLGAVSPDSFDTLHSYSNTFQMPFVTPWFPEKV 139
            ..|.|..|::..|.|               .:::||.|......|.:.|...::|.::.:.|..:
plant    81 IALAAATDLLKNAKA---------------EAIVGAQSLQEAKLLATISEKAKVPVISTFLPNTL 130

  Fly   140 -LTPSSGFLDFALSMRPDYHQAIIDTIQFYGWRKIIYLYDSHDGLLRLQQIYQGLRPGNESFQVE 203
             |.....|:.:......: .:.|...||.:..:.::.:|:..|......||..      |:||.:
plant   131 SLKKYDNFIQWTHDTTSE-AKGITSLIQDFSCKSVVVIYEDADDWSESLQILV------ENFQDK 188

  Fly   204 LVKRISNVSMAIEFL---HTLEQIGRFE--NKHIVLDCPTEMAKQILIQHVRDLRLGRRTYHYLL 263
            .:....:.|.|:...   |.:.|:.:.:  ...:.:...:|:....|.|.|..|.|....:.::|
plant   189 GIYIARSASFAVSSSGENHMMNQLRKLKVSRASVFVVHMSEILVSRLFQCVEKLGLMEEAFAWIL 253

  Fly   264 SGLVMDDRWESEIIEFGAI-----NITGFRIVDTNRRLVREFYDSWKRLDPQMSVGAGRESISAQ 323
            :...|:      .:|..||     .:.||:........|:.|   ..||..:|......|..|..
plant   254 TARTMN------YLEHFAITRSMQGVIGFKSYIPVSEEVKNF---TSRLRKRMGDDTETEHSSVI 309

  Fly   324 AAL-MYDAVFVLVEAFNKILRKKPDQFRNNVQRRSQTLMVAQAAASTSSDGYNYSASGGGGGNGG 387
            ..| .:|...:|..|..|                                   :|.||
plant   310 IGLRAHDIACILANAVEK-----------------------------------FSVSG------- 332

  Fly   388 AGGGFAGSDSGGSGGMASRALDCNTAKGWVNAWEHGDKISRYLRKVEIEGLTGDIKFNDDGRRVN 452
                    ....|..:::..||.                   :|....:||:|||:.:|: :.::
plant   333 --------KVEASSNVSADLLDT-------------------IRHSRFKGLSGDIQISDN-KFIS 369

  Fly   453 YTLHVVEMTVNSAMVKVAEWNDDAGLQ------PLNAKYVRLRPHVEFEKNRTYIVTTVLEEPYI 511
            .|..:|.:. .....::..|:..:..|      |..::.:. |..|..||.          |..:
plant   370 ETFEIVNIG-REKQRRIGLWSGGSFSQRRQIVWPGRSRKIP-RHRVLAEKG----------EKKV 422

  Fly   512 MLKQVAFGEKL-H----------GNNRFEGYCKDLADLLAKELGINYELRLV----KDGNYGSEK 561
            :...|..|.|: |          |.|...|:|.::.......  .||||..:    .:.|.....
plant   423 LRVLVTAGNKVPHLVSVRPDPETGVNTVSGFCVEVFKTCIAP--FNYELEFIPYRGNNDNLAYLL 485

  Fly   562 SSAHGGWDGMVGELVRKEADIAIAAMTITAERERVIDFSKPFMSLGISIMIKKPVKQTPGVFSFM 626
            |:....:|..||::            |||:.|...:||:.|:..:||.|:..|  |::.|:::|.
plant   486 STQRDKYDAAVGDI------------TITSNRSLYVDFTLPYTDIGIGILTVK--KKSQGMWTFF 536

  Fly   627 NPLSQEIWVSVIFSYIGVSIVLFFVSRFSPHEWRLVQQQPQQSQSPDPHAHHEQLANQQPPGIIG 691
            :|..:.:|::....::...||::.|.|               |.:|:
plant   537 DPFEKSLWLASGAFFVLTGIVVWLVER---------------SVNPE------------------ 568

  Fly   692 GAPLPAPPGPPTPGAQTAAGAAALQAALSAGSPGSGGSSSAVVNEFSVWNSFWFSLAAFMQQGCD 756
                                           ..||.|...:::    :|  |.||...|..:.
plant   569 -------------------------------FQGSWGQQLSMM----LW--FGFSTIVFAHRE-- 594

  Fly   757 LSPRSVSGRIAAASWFFFTLILISSYTANLAAFLTVERMVTPINSPEDLAMQTEVQYGTLLHGST 821
             ..:.:|.|.....|.|..|||.|||:|||.:..|:.||              ::.:..:..|||
plant   595 -KLQKMSSRFLVIVWVFVVLILTSSYSANLTSTKTISRM--------------QLNHQMVFGGST 644

  Fly   822 WDFFRRSQIGLHNKMWEYMNSRKHVFVPTYDEGIKRVRNSKGKYALLVESPKNEYVNAREPCDTM 886
            ...  .:::|..|.:..|....:       |..:..|.|.....::|:.:..|::|
plant   645 TSM--TAKLGSINAVEAYAQLLR-------DGTLNHVINEIPYLSILIGNYPNDFV--------- 691

  Fly   887 KVGRNLDTKGFGIATPLGSALKDPINLAVLTLKENGELIKLRNKWWYEKAE-----------CST 940
            ...|..:|.|||.....||.|...::..:..|:..| ::|...|.|::|.:           .||
plant   692 MTDRVTNTNGFGFMFQKGSDLVPKVSREIAKLRSLG-MLKDMEKKWFQKLDSLNVHSNTEEVAST 755

  Fly   941 HKDGETSHSELSLSNVAGIFYILIGGLLVSVFVAILEYCFRSRDSRS 987
            :.|.|.| ...:...:.|:|  :|.|....:.:|:  :.|.:|...|
plant   756 NDDDEAS-KRFTFRELRGLF--IIAGAAHVLVLAL--HLFHTRQEVS 797

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
GluRIB	NP_001261621.2	PBP1_iGluR_AMPA	43..480	CDD:380603	75/472 (16%)
		PBP2_iGluR_AMPA	497..938	CDD:270433	90/466 (19%)
		Lig_chan	630..966	CDD:459656	65/346 (19%)
GLR1.1	NP_187061.1	PBP1_GABAb_receptor_plant	31..397	CDD:380645	75/467 (16%)
		Periplasmic_Binding_Protein_Type_2	421..737	CDD:473866	87/437 (20%)