DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluRIB and Ir94d

DIOPT Version :9

Sequence 1:NP_001261621.2 Gene:GluRIB / 44484 FlyBaseID:FBgn0264000 Length:1182 Species:Drosophila melanogaster
Sequence 2:NP_001138099.1 Gene:Ir94d / 7354412 FlyBaseID:FBgn0259193 Length:593 Species:Drosophila melanogaster


Alignment Length:127 Identity:32/127 - (25%)
Similarity:43/127 - (33%) Gaps:44/127 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 LICNQFSRGVYSMLGAVSPDSFDTLHSY-----SNTFQMPFVTPWFPEKVLTPSSG--------- 145
            ||.:..:..|...|||:.|....|.:||     |....||     .||:|  |.|.         
  Fly   242 LIASVQNGSVQIALGAIYPQVPYTGYSYPIELMSWCLMMP-----VPEEV--PHSQLYSMVFSPM 299

  Fly   146 ----------FLDFALSMRPDYHQAIIDTIQFYGWRKIIYLYDSHDGLLR---LQQIYQGLR 194
                      .:...|||          .::.:|:|.....|..||..||   .|..|:.||
  Fly   300 AFGITIVAMVLISLTLSM----------ALRLHGYRVSFSEYFLHDSCLRGVLSQSFYEVLR 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRIBNP_001261621.2 PBP1_iGluR_AMPA 43..478 CDD:107375 32/127 (25%)
ANF_receptor 55..461 CDD:279440 32/127 (25%)
PBP2_iGluR_AMPA 497..938 CDD:270433
Lig_chan 632..967 CDD:278489
Ir94dNP_001138099.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462567
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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