Sequence 1: | NP_001261621.2 | Gene: | GluRIB / 44484 | FlyBaseID: | FBgn0264000 | Length: | 1182 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001268858.2 | Gene: | Gria3 / 53623 | MGIID: | 95810 | Length: | 888 | Species: | Mus musculus |
Alignment Length: | 960 | Identity: | 410/960 - (42%) |
---|---|---|---|
Similarity: | 549/960 - (57%) | Gaps: | 160/960 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 42 IPLGAIFEQGTDEVQSAFKYA--MLNHNLNVSSRRFELQAYVDVINTADAFKLSRLICNQFSRGV 104
Fly 105 YSMLGAVSPDSFDTLHSYSNTFQMPFVTPWFPEKVLTPSSGFLDFALSMRPDYHQAIIDTIQFYG 169
Fly 170 WRKIIYLYDSHDGLLRLQQIYQGLRPGNESFQVELVKRISNVSMAIEFLHTLEQIGRFENKHIVL 234
Fly 235 DCPTEMAKQILIQHVRDLRLGR--RTYHYLLSGLVMDDRWESEIIEFGAINITGFRIVDTNRRLV 297
Fly 298 REFYDSWKRLDPQMSVGAGRESISAQAALMYDAVFVLVEAFNKILRKKPDQFRNNVQRRSQTLMV 362
Fly 363 AQAAASTSSDGYNYSASGGGGGNGGAGGGFAGSDSGGSGGMASRALDC--NTAKGWVNAWEHGDK 425
Fly 426 ISRYLRKVEIEGLTGDIKFNDDGRRVNYTLHVVEMTVNSAMVKVAEWNDDAGLQPLNAKYVRLRP 490
Fly 491 HVEFE--------KNRTYIVTTVLEEPYIMLKQVAFGEKLHGNNRFEGYCKDLADLLAKELGINY 547
Fly 548 ELRLVKDGNYGSEKSSAHGGWDGMVGELVRKEADIAIAAMTITAERERVIDFSKPFMSLGISIMI 612
Fly 613 KKPVKQTPGVFSFMNPLSQEIWVSVIFSYIGVSIVLFFVSRFSPHEWRLV--QQQPQQSQSPDPH 675
Fly 676 AHHEQLANQQPPGIIGGAPLPAPPGPPTPGAQTAAGAAALQAALSAGSPGSGGSSSAVVNEFSVW 740
Fly 741 NSFWFSLAAFMQQGCDLSPRSVSGRIAAASWFFFTLILISSYTANLAAFLTVERMVTPINSPEDL 805
Fly 806 AMQTEVQYGTLLHGSTWDFFRRSQIGLHNKMWEYMNSRK-HVFVPTYDEGIKRVRNSKGKYALLV 869
Fly 870 ESPKNEYVNAREPCDTMKVGRNLDTKGFGIATPLGSALKDPINLAVLTLKENGELIKLRNKWWYE 934
Fly 935 KAECSTHKDG-ETSHSELSLSNVAGIFYILIGGLLVSVFVAILEYCFRSR 983 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
GluRIB | NP_001261621.2 | PBP1_iGluR_AMPA | 43..478 | CDD:107375 | 136/440 (31%) |
ANF_receptor | 55..461 | CDD:279440 | 128/411 (31%) | ||
PBP2_iGluR_AMPA | 497..938 | CDD:270433 | 245/443 (55%) | ||
Lig_chan | 632..967 | CDD:278489 | 181/338 (54%) | ||
Gria3 | NP_001268858.2 | PBP1_iGluR_AMPA_GluR3 | 29..403 | CDD:380610 | 139/454 (31%) |
PBP2_iGluR_AMPA | 416..799 | CDD:270433 | 245/443 (55%) | ||
Glutamate binding | 502..504 | 0/1 (0%) |