DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluRIB and Ir76b

DIOPT Version :9

Sequence 1:NP_001261621.2 Gene:GluRIB / 44484 FlyBaseID:FBgn0264000 Length:1182 Species:Drosophila melanogaster
Sequence 2:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster


Alignment Length:695 Identity:134/695 - (19%)
Similarity:242/695 - (34%) Gaps:213/695 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   456 HVVEMTVNSAMVKVAEWNDD-----AG---------LQPLNAKYVRLRPHVEFEKNRTYIVTTVL 506
            ::::|..|..:..|.|...|     ||         |:.:|.|..:||..:::...:...:.|:.
  Fly    27 NLIQMGENGTLSPVTELPMDVDASEAGFDADAPVETLETINRKKPKLREMLDWIGGKHLRIATLE 91

  Fly   507 EEPYIMLKQVAFGEKLHGNNRF-EGYCKDLADLLAKELGINYELRLVKDGNYGSEKSSAHGGWDG 570
            :.|      :::.|.|....|. .|....:.|.|.|:....||:.:.:|...||...     :|.
  Fly    92 DFP------LSYTEVLENGTRVGHGVSFQIIDFLKKKFNFTYEVVVPQDNIIGSPSD-----FDR 145

  Fly   571 MVGELVRKE-ADIAIAAMTITAERERVIDFSKPFMSLGISIMIKKPVKQTPGVFSFMNPLSQEIW 634
            .:.|:|... .|:|.|.:...:::...:.:|...:..|..||:.:..:::......:.|....:|
  Fly   146 SLIEMVNSSTVDLAAAFIPSLSDQRSFVYYSTTTLDEGEWIMVMQRPRESASGSGLLAPFEFWVW 210

  Fly   635 VSVIFSYIGVSIVLFFVSRFSPHEWRLVQQQPQQSQSPDPHAHHEQLANQQPPGIIGGAPLPAPP 699
            :.::.|.:.|..:::.:         ::                  |.|:    :.|       .
  Fly   211 ILILVSLLAVGPIIYAL---------II------------------LRNR----LTG-------D 237

  Fly   700 GPPTPGAQTAAGAAALQAALSAGSPGSGGSSSAVVNEFSVWNSFWFSLAAFMQQGCDLSPRSVSG 764
            |..||                                :|:.:..||...|.|:||..|||.:.|.
  Fly   238 GQQTP--------------------------------YSLGHCAWFVYGALMKQGSTLSPIADST 270

  Fly   765 RIAAASWFFFTLILISSYTANLAAFLTVERMVTPINSPEDLAMQTEVQYGTLLHGSTWDFFRRS- 828
            |:..|:|:.|..||.|.|||||.||||:.:...|.|:..|:.  |:.::...:.|...::..|: 
  Fly   271 RLLFATWWIFITILTSFYTANLTAFLTLSKFTLPYNTVNDIL--TKNKHFVSMRGGGVEYAIRTT 333

  Fly   829 --QIGLHNKMWE------------------YMNSRKHVFV---PTYDEGIKRVRNSKGKYALLVE 870
              .:.:.|:|.:                  |:....:|||   |..:..:.|....:...:...|
  Fly   334 NESLSMLNRMIQNNYAVFSDETNDTYNLQNYVEKNGYVFVRDRPAINIMLYRDYLYRKTVSFSDE 398

  Fly   871 SPKNEYVNAREPCDTMKVGRNLDTKGFGIATPLGSALKDPINLAVLTLKENGELIKLRNKWWYEK 935
            .....:..|:||  .:|..|.       .|.|:||.|....:..:|.|.|:| ::|..:|.....
  Fly   399 KVHCPFAMAKEP--FLKKKRT-------FAYPIGSNLSQLFDPELLHLVESG-IVKHLSKRNLPS 453

  Fly   936 AECSTHKDGETSHSELSLSNVAGIFYILIGGLLVSVFVAILEYCFR------------------- 981
            ||......|.|.. :|...::...:||::.|...::.|...|..||                   
  Fly   454 AEICPQDLGGTER-QLRNGDLMMTYYIMLAGFATALAVFSTELMFRYVNSRQEANKWARHGIGRT 517

  Fly   982 ------------------------------------------------------SRDSRSASSGS 992
                                                                  :|..|..::|:
  Fly   518 PNGQSVAPSRWLRGWRRLNSGHGQLLGASTHGQNVTPPPPYQSIFNGGSHGDPLNRWRRPLANGN 582

  Fly   993 GMGLGMGLGGGMSGGSLGKANGSMML------GPSSAVPGGMPSS 1031
            .:|.|:.|||...||.....||...:      |.|..||...||:
  Fly   583 ALGNGVLLGGDSEGGVRRLINGRDYMVFRNPNGQSQLVPVRSPSA 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRIBNP_001261621.2 PBP1_iGluR_AMPA 43..478 CDD:107375 7/35 (20%)
ANF_receptor 55..461 CDD:279440 0/4 (0%)
PBP2_iGluR_AMPA 497..938 CDD:270433 93/466 (20%)
Lig_chan 632..967 CDD:278489 74/358 (21%)
Ir76bNP_649176.1 Periplasmic_Binding_Protein_Type_2 83..437 CDD:304360 87/445 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462530
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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