DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluRIB and Ir75a

DIOPT Version :9

Sequence 1:NP_001261621.2 Gene:GluRIB / 44484 FlyBaseID:FBgn0264000 Length:1182 Species:Drosophila melanogaster
Sequence 2:NP_649012.2 Gene:Ir75a / 39982 FlyBaseID:FBgn0036757 Length:629 Species:Drosophila melanogaster


Alignment Length:847 Identity:149/847 - (17%)
Similarity:282/847 - (33%) Gaps:282/847 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 GWRKIIYLYDSHDGLLRLQQIYQGLRPGNESFQVELVKRISNVS-MAIEFL-HTLEQIGRFENKH 231
            |:..:.:.:.|.:.|...||..:.:.|.....|...::.:.|.| :.:.:: ||...:.      
  Fly    20 GFIVLFHCWQSDESLKFAQQFMKPIHPILVYHQFVQMRGVLNWSHLELSYMGHTQPTLA------ 78

  Fly   232 IVLDCPTEMAKQILIQHVRDLRLGRRTYHYLLSGLVMDDRWESEIIEFGAINITGFRIVDTNRRL 296
            |.:|...:..:.:|.:..|: ::..:.||:||.|.      :|::                    
  Fly    79 IYVDIKCDQTQDLLEEASRE-QIYNQHYHWLLVGN------QSKL-------------------- 116

  Fly   297 VREFYDSWKRLDPQMSVGAGRESISAQAALMYDAVFVLVEAFNKILRKKPDQFRNNVQRRSQTLM 361
              ||||.:           |..:||..|.:.|                ..:|.::|         
  Fly   117 --EFYDLF-----------GLFNISIDADVSY----------------VKEQIQDN--------- 143

  Fly   362 VAQAAASTSSDGYNYSASGGGGGNGGAGGGFAGSDSGGSGGMASRALDCNTAKGWVNAWEHGDKI 426
             ..:.|....|.||         ||...||  ..:..||..|:.....|              :.
  Fly   144 -NDSVAYAVHDVYN---------NGKIIGG--QLNVTGSHEMSCDPFVC--------------RR 182

  Fly   427 SRYLRKVEIEGLTGDIKFNDDGRRVNYTLHVVEMTVNSAMVKVAEWNDDAGLQPLNAKYVRLRPH 491
            :|:|..::...     |:.:..:..:..|.|..:.....:.    .:||..::.|:         
  Fly   183 TRHLSSLQKRS-----KYGNREQLTDVVLRVATVVTQRPLT----LSDDELIRFLS--------- 229

  Fly   492 VEFEKNRTYIVTTVLEEPYIMLKQVAFGEKLHGNNRFEGYCKDLADLLAKELGINYELRLVKDGN 556
               ::|.|:|.:.           ..||..|              .|:.::| ::.:::.:...:
  Fly   230 ---QENDTHIDSL-----------ARFGFHL--------------TLILRDL-LHCKMKFIFSDS 265

  Fly   557 YGSEKSSAHGGWDGMVGELVRKEADIAIAAMTITAERERVIDFSKPFMSLGI--SIMIKKPVKQT 619
            :  .||...|   |.||.:|.:.||:.......|..|   :.:....:..|.  |:.|.:    |
  Fly   266 W--SKSDVVG---GSVGAVVDQTADLTATPSLATEGR---LKYLSAIIETGFFRSVCIFR----T 318

  Fly   620 P---GVFS--FMNPLSQEIW--VSVIFSYIGVSI-VLFFVS-RFSPHEWRLVQQQPQQSQSPDPH 675
            |   |:..  |:.|.|..:|  ...:.|.|||.: :.|::. :.....|||..            
  Fly   319 PHNAGLRGDVFLQPFSPLVWYLFGGVLSLIGVLLWITFYMECKRMQKRWRLDY------------ 371

  Fly   676 AHHEQLANQQPPGIIGGAPLPAPPGPPTPGAQTAAGAAALQAALSAGSPGSGGSSSAVVNEFSVW 740
                               ||                                         |:.
  Fly   372 -------------------LP-----------------------------------------SLL 376

  Fly   741 NSFWFSLAAFMQQGCDLSPRSVSGRIAAASWFFFTLILISSYTANLAAFLTVERMVTPINSPEDL 805
            ::|..|..|...|...|.|||..||:...:.|..:.|:.:.||:.:.:.|....:.:.|.:...|
  Fly   377 STFLISFGAACIQSSSLIPRSAGGRLIYFALFLISFIMYNYYTSVVVSSLLSSPVKSKIKTMRQL 441

  Fly   806 AMQTEVQYGTLLHGSTWDFFRRSQI-GLH---NKMWEYMNSRKHVFVPTYDEGIKRVRNSKGKYA 866
            | ::.:..|......|..:...|:: .:|   .:..|.......:::|. ::|:.|||::.| |.
  Fly   442 A-ESSLTVGLEPLPFTKSYLNYSRLPEIHLFIKRKIESQTQNPELWLPA-EQGVLRVRDNPG-YV 503

  Fly   867 LLVESPK-----NEYVNAREPCDTMKV------------GRNLDTKGFGIATPLGSALKDPINLA 914
            .:.|:..     ..|..|:|.||..:|            .||             |..|:...|.
  Fly   504 YVFETSSGYAYVERYFTAQEICDLNEVLFRPEQLFYTHLHRN-------------STYKELFRLR 555

  Fly   915 VLTLKENGELIKLRNKWWYEKAECSTHKDGETSHSELSLSNVAGIFYILIGGLLVSVFVAILEYC 979
            .|.:.|.|...|.|:.|.:.|..|.......|    :.:..||.:..:||...::.|.:.::|..
  Fly   556 FLRILETGVYRKQRSYWVHMKLHCVAQNFVIT----VGMEYVAPLLLMLICADILVVVILLVELA 616

  Fly   980 FR 981
            ::
  Fly   617 WK 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRIBNP_001261621.2 PBP1_iGluR_AMPA 43..478 CDD:107375 51/310 (16%)
ANF_receptor 55..461 CDD:279440 49/293 (17%)
PBP2_iGluR_AMPA 497..938 CDD:270433 89/472 (19%)
Lig_chan 632..967 CDD:278489 67/359 (19%)
Ir75aNP_649012.2 Lig_chan 337..603 CDD:306551 67/357 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462518
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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